Hibiscus syriacus (Rose-of-Sharon): 120132674
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Entry
120132674 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120132674
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120132674
Surveillance factors
Other surveillance factors
120132674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
120132674
NCBI-ProteinID:
XP_039005316
LinkDB
All DBs
Position
Unknown
AA seq
1470 aa
AA seq
DB search
MDEGKFDLPDDLLSSKIDSDHSPKDQPTSESGIPLSPQWLYSKVVDPKMLPAGVSADIKS
PNLLPHGASGDPNLKDSWRLDGSQDKKEWRRAAPELENSRHWREEERETSLLGRRDSRKE
DWRPDISSSMDASENRNVSSERWQDVSSRGSGLESRRENKWSSRWGLEDKEKDSRNEKRT
DAKKEDAPSEKLSFASGGRLASERENDSRDKWRPRHRLEGHAGRSASYRSAPGFGLERGR
VERSHVGFTAGRGKPQPVSVTGALPGDKNKTFNAYCYPRGKLLDIYRKQKTAPNFDTLPD
EMDHSSTITQNHIVEPLAFVTPVAEEEAAIGDIWKGNTTSSDVICDSFRDTSEEKQCFLV
NREDSVESGEKASVNNNYQGNHAETFNLSDSQMTMKKEINSSKEGGQKYMTPSGIDVTNA
FGSNEDIDGSARYMDGLKSFDNRPVADMKIEKDYSVEENVSSMQFGVGSEVSEGSSSLFG
FQSLQPTLDCDQINFEGNKEAHSLESTGPPEELSLFYLDPQGVIQGPYMGIDIISWFEQG
YFGTDLPIRLENAPDELPFQELGEVMPHLRMNSGSASSGSAVARLQIPDCFEGISEETIF
SASNPATELKGSAIGHKQQQFLSAFETPDANFQSKGLSQNYHSEHQYYEDEKLHKFAAAH
ADGKFNGNYLERRPGNAGAEPLKVSVEIQDPFGNPSSHLPIANEFSKTNLPSHRGDALLP
DAWPDAYRRNAVYNPNIRVGSPLSRREQECNGLDLQHLMSQKLPSESHHEENHLFHSFSH
SAGFGAEQVHSFDLTQSKNLDHQQSIHLSAPHMEHLLELQFEQQRQQQQLELQRQQQLEL
QRQRQQQLELQRQRQQQLELQRQQQQQLELQRQQQQQLELQRRQHQLELQRRQQQLRNHQ
IKLLQQLQQQHLQQQPSQAQELLLNQLLQHQVSDPGYGQHIFDAARDNLLDQVQLKRNLL
SELQQNSHASRQLDSSLEQIIQANINQRAVQEHQLHLQREQFQVEQLSRALNQQLGMEGV
DNMLVLGLLMKSVRLSGILAFMPRLNVGLNGSDIHQKRFYSSEEQFNNLKRNHALLEQQQ
QGAIDNLNSPDLSDHLYMHSNDRLGSFSSGIHSLGRQFSGDVYTSHPDLTDSYQSRQNEE
LENSWVEKQMQQLSLEADLQRRGSEVDSRTWTSAGGIHEKSKKALMDLHQKFGVHSTQSS
ELDYQYSTSSSNLPFDHFTDQEVHVNSSFSEGPQNSVSFAEQSFKSVSGDMFSSSYPGAG
LMEKSAMDKELIELKGKEKRSGLKGKISRSGSVSGSEDWEQAEASLICGDLQGRTHIQHG
SFSDKASQVPSSQNVYSEQNAVLMKQKSLAASEGRQEGMAMNAGAGAKRSTETQASGKNN
AGMRRTSSYNDAAASEASSFIDILKKPVHLQGTEAAPYGSAFEPSSDSASQAPRAGKKKG
KRGKQIDPALLGFKVSSNRILMGEIQRPDD
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggaaaattcgatctgccggatgatctcctatcttccaaaatcgactctgac
cactcccccaaagatcaaccaacttcggagagcggcatacctttgtcccctcaatggctt
tactctaaagtggttgatcctaagatgttacctgctggagtgtctgcggatataaaatca
ccgaatttgttgccccatggagcctctggtgatcccaatctgaaagatagttggcgttta
gatggttctcaggacaagaaagaatggaggagggctgcacctgaacttgaaaacagtcgc
cactggcgtgaagaggagagagaaactagcttacttggccgaagggatagcagaaaagaa
gactggcgccctgatatctcttcaagtatggatgcttctgaaaataggaatgtttcttct
gagcgatggcaagatgttagtagtcgtggttcagggcttgaatctcgaagagagaacaag
tggtcttcaagatggggtcttgaagacaaagaaaaggattctcgaaacgaaaagaggaca
gatgcgaagaaggaagatgccccttccgagaaactatcttttgctagtggggggcgccta
gcttctgagcgtgagaatgattctcgtgataaatggaggccacgtcatcgtttggaaggt
catgctggtaggtctgcttcttaccgcagtgctccaggattcggtttggagaggggacga
gtggagagatcacatgtgggttttacagcaggacgagggaagccgcaacctgtttctgtt
actggagctcttccaggggataaaaacaagacttttaatgcatattgctacccaagagga
aaactccttgacatttaccgcaagcaaaagactgctccaaattttgacaccctgcccgat
gagatggatcattcatcaacgataacccaaaatcatattgttgagcctctggcttttgtt
actcctgtcgcagaggaagaggctgccattggagatatatggaaaggaaacaccacaagc
agtgatgtgatttgcgattcatttagggacacaagtgaagaaaaacaatgtttcttggtt
aacagggaggacagtgttgaatctggtgagaaggcttccgtaaacaataattatcaaggg
aatcatgctgagacatttaatttgtcagattcacagatgactatgaagaaagaaataaat
agttcaaaggaaggtggacaaaaatatatgacaccatctggtattgatgtaaccaatgct
ttcgggtcaaatgaggatatcgatggttctgcaagatacatggatggattgaaatctttt
gataatcgacctgtagctgatatgaaaatagaaaaggactatagtgtggaggaaaatgta
tcatctatgcaatttggagtgggaagcgaggtttctgaaggctcaagctctctatttggt
tttcagtcactgcagcctactctcgattgtgaccagataaattttgagggcaataaggaa
gcacattcacttgaaagtactggccctcccgaagaattgagtttattctatcttgatcct
caaggggtaattcagggaccatatatggggattgacataatttcatggtttgagcaaggc
tattttggtacagacttacctattcgattggaaaatgctcctgatgaattgcctttccaa
gaacttggtgaagtgatgcctcacctaaggatgaattctggttcagcctccagtggcagt
gcagttgcaagattgcagatacctgattgttttgaagggatctcggaagagaccatattt
tctgcttctaatcctgctacagaactgaagggatctgccattggacataagcagcagcag
tttttgtctgcttttgagactcctgatgctaattttcagtcaaaagggctttctcaaaat
tatcattctgagcaccagtattatgaagatgaaaagctccataaatttgctgctgctcat
gcagatggtaagtttaacggaaattatcttgagagaaggcctggaaatgctggggctgag
cctttgaaagtttctgttgaaattcaagatccttttggcaatccttcaagccatctgccc
attgcaaatgaattttcaaaaaccaatttaccttctcatcgtggtgatgcgttacttcct
gatgcttggcctgatgcttatagaagaaatgctgtgtataatcctaacatccgtgtaggc
agtcccttatctcgcagggaacaagaatgcaatggtttagacttacagcacctaatgtca
caaaagttgcccagtgaatcacatcatgaggaaaatcatttgtttcattccttttcacat
tcagctggatttggtgctgagcaagttcatagttttgatctgacgcaaagcaagaatctc
gatcaccagcaatcaatacatctttcagctccacatatggaacatcttttggaacttcaa
tttgaacagcagcggcagcagcagcagttggaacttcaacgacagcagcagcttgaactt
cagcgacagcggcagcagcagcttgaacttcagcgacagcggcagcagcagcttgaactt
cagcgacagcagcagcagcagcttgaacttcagcgacagcagcagcagcagcttgaactt
cagcgacggcagcatcagcttgaacttcagcggcggcagcagcagcttcgtaaccatcaa
attaagttgttgcagcaactgcaacaacaacatctacaacagcagccttctcaagctcag
gagttgctactcaatcaattgctgcaacatcaggtttctgatcctggttatggccagcac
atatttgatgctgctagggacaacctgcttgatcaggttcagttaaaaaggaatcttctg
agtgagttgcagcaaaattctcatgcttcgaggcaattggattcatcactggagcagatt
atccaagccaatattaaccagagagcagtccaagagcatcagcttcatcttcaacgtgag
cagtttcaagtagagcaattatctagggctctgaaccaacaattaggtatggagggggta
gacaacatgctggttcttggtctgttgatgaagtcggtcaggttgtcaggaatcctagca
ttcatgcccaggctcaacgtgggattgaatggttcagatattcaccagaagaggttttac
tcttcagaagagcagtttaacaatcttaaaaggaatcatgctttgcttgagcaacagcag
caaggggctattgacaatttaaattctccagatctatctgaccatctctatatgcactct
aacgaccgactgggatcattttcttctggtatccattctcttggccgacaattttcgggt
gatgtgtatacttctcatccagatttaacagatagctaccaatctaggcaaaatgaggaa
ctagaaaatagttgggtggaaaaacaaatgcaacaattaagtcttgaagcagatctgcaa
agaagggggtctgaagttgattcaaggacttggacatcagctggagggattcatgaaaaa
tctaagaaagctttaatggaccttcaccaaaaatttggtgtccattccacacagtcatcg
gaactagattatcaatattctacctcatcttcgaatttaccttttgatcatttcactgat
caggaagttcatgtgaacagctcattttcagaaggccctcaaaattccgtctcatttgca
gaacagtcattcaaatcggtctctggagatatgttttctagtagttatccaggtgcaggg
ttgatggaaaaatctgccatggacaaagaattaattgaattgaagggtaaggagaagaga
agtggattgaaaggaaagatttctaggagtggttctgtgtcagggtcagaggactgggag
caagcagaggcatctttgatctgtggtgatctacaaggtagaacccatatccagcatggt
tcttttagtgataaagcttctcaggttccatcatcccaaaatgtttactcggaacaaaat
gcagtgcttatgaagcagaaaagccttgcagcatctgaagggagacaggaaggcatggca
atgaatgcaggcgcaggtgcgaagaggagcacagaaactcaggcatcgggcaagaacaat
gcaggtatgagaaggacctcatcttataacgatgcggcagcgtccgaggcgtcatcattc
atagatattcttaagaagccggttcatcttcaaggaaccgaggcagcaccgtacggctct
gcttttgagccgtcatctgattccgcttcacaagctcctcgagctggcaagaaaaagggg
aagaggggaaaacagattgatcctgccttgctgggtttcaaggtttcaagcaaccgcatt
ttgatgggtgagatccaacgccctgatgattaa
DBGET
integrated database retrieval system
