Hibiscus syriacus (Rose-of-Sharon): 120133223
Help
Entry
120133223 CDS
T09559
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120133223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120133223
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120133223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
120133223
NCBI-ProteinID:
XP_039005784
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MRKKIMYSFPDEVLEHVFSFIQSDKDRNAVSVVCKSWCEIERWCRRKVFIGNCYAVSPRM
VIKRFPEVRSIELKGKPHFADFNLVPDGWGGYVLPWIVEMAGAYPWLEEIRLKRMVVTDE
SLELIAKSFKNFKVLVLFSCEGFSTDGLAAIAAGCKNLRELDLRESEVDDLSGHWLRHFP
ETCTSLLSLNISCLGSDEVSVSALERLVGRCPNLKSLRLNRGVTVDKIANILHRAPQLVD
FGTGSYSAELRPDVLLNLAGAFSCCKELKSLSGFWDVVPAYLPALYSVCSRLTSLNLSYA
TIQNPEIIKLVSNCPNLQRLLVLDYIEDSGLEALASSCKDLQELRVFPSDPFGAEPHVSL
TEQGLVAVSLGCPKLQSVLYFCRRMTNAALVTIAQNSPNFTRFRLCIIEPKTADYLTLEP
LDVGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSG
CESLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCTVSFGACKLIGLKMPRLNVEVID
ETEPPDSRPESCPVEKLYIYRSVSGPRFDMPPFVWTMDEERKVMH
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagaaaattatgtattcctttccggatgaagtgctggagcacgtcttctctttc
atccaatccgacaaagacagaaacgcggtctcggtggtgtgtaaatcgtggtgcgaaata
gaacgttggtgtcggaggaaggtgtttatcggcaactgttatgccgtgagccctaggatg
gttattaagcggttcccggaagttagatccattgagctgaaagggaagccgcacttcgcg
gacttcaatctggtcccagacggttggggtggctacgttcttccgtggatcgtcgagatg
gctggcgcctacccttggctcgaagagattcggcttaaaaggatggtagttacggatgaa
agcttggagcttatcgctaagtcgtttaagaatttcaaagtgctggtgcttttttcttgc
gaagggttctcaaccgatggacttgctgccattgctgctggttgcaagaatctgagagag
ctggacttgagggaaagtgaagtggatgatttgagtgggcattggcttagacattttcct
gagacgtgcacatccttactgtccctaaacatttcttgcttgggatccgatgaagttagt
gtctcagccttggagcgcctggtgggtagatgtcccaacctgaagtctcttcggctcaac
cgtggagttaccgttgataagattgccaacattttacatcgtgcgccacagttggttgat
tttggcactggtagctattctgctgagctacgacctgatgtcttgttgaacttggctgga
gctttttcttgttgcaaggagttaaagagcttgtctgggttttgggatgtggtcccggct
tatcttccagctctttattccgtgtgctctagattaacatctctgaacttaagctatgct
accatacagaatcctgaaataatcaagcttgtaagcaattgtccaaatttgcagcgcctt
ttggtacttgactacattgaagatagtggccttgaagcacttgcttctagttgtaaggac
ctacaggaattacgtgtgttcccatctgacccatttggtgcagagccgcatgtctccttg
acagaacagggccttgtcgctgtttctttgggttgtcctaagctacagtcagttttgtat
ttctgccgtcgaatgactaatgcagcattagtcaccatagcccagaatagtccaaacttt
acacgttttcgtctttgtataattgagcctaaaacagctgattacctgaccctcgagcca
cttgatgttggttttggagccattgtcgagcattgcaaggatctcaggcggctttccctc
tctggtctcctcacagatcgtgtatttgaatatattgggacatatgcaaaaaaactagaa
atgctgtccgtggcttttgcgggagatagtgatttaggactccatcatgtgctttccggc
tgtgaaagcctccggaagctagagatccgggactgtccctttggggacaaggctcttttg
gccaatgctgcaaagctggagacaatgcgatccctttggatgtcatcttgcaccgtgagt
ttcggagcttgtaagctaatagggctgaagatgcccaggctgaatgttgaagttatagat
gagacggaacctccagattcaagacccgaaagctgcccagttgagaagctctacatatat
aggtctgtctctgggccaaggtttgacatgcctccctttgtttggacaatggatgaagaa
cgtaaggtcatgcattga
DBGET
integrated database retrieval system
