Hibiscus syriacus (Rose-of-Sharon): 120133326
Help
Entry
120133326 CDS
T09559
Name
(RefSeq) oligouridylate-binding protein 1B-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120133326
03041 Spliceosome [BR:
hsyr03041
]
120133326
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120133326
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120133326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
120133326
NCBI-ProteinID:
XP_039005861
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MEPLRLKQQQQALMQQALLQQQSLYHPGILAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI
HSQVTEPLLQEVFASTGPVEACKLIRKEKSSYGFIHYFDRRSAALSIFSLNGRHLFGQPI
KVNWAYASGQREDTSGHFNIFVGDLSPEVTDAMLYACFSVYQSCSDARVMWDQKTGRSRG
FGFVSFRNQKDAQSAINDLSGKWLGSRQIRCNWATKGATSNDDKQSSDAKSVVELTNGSS
EDGKETTNNEAPENNPQYTTVYVGNLAPEVTQLELHRHFHALGAGVIEEVRVQRDKGFGF
VRYNTHAGAALAIQMGNTQSFLCGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSAID
LLAYERQLAMSKVGGVHALMHPQGQHPLKQAAMGVGAAGGSQAIYDDGFQNVAAARQLLY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggagcccctgaggctgaagcaacaacaacaggccctgatgcaacaagctctcctccaa
caacagtctctctatcaccctggcatcttagcacctcctcagatagagccaatcccaagt
ggaaatctgccacctggttttgatccaagtacttgccgcagcgtgtatgtgggaaacatc
cattctcaagtgactgaaccactactccaagaggtttttgcaagtactggtcctgttgaa
gcttgcaagcttattagaaaggaaaagtcatcatatgggttcatccactactttgatcgt
agatcagctgctctttctatattttctctaaatggaaggcatttatttggacagcctatc
aaggtcaattgggcatatgctagtggtcagagagaggatacatcaggtcactttaatatt
tttgttggggatctcagtcctgaggttactgatgcaatgctgtatgcatgcttttctgtc
tatcagagttgttcggatgcaagggttatgtgggatcaaaaaactgggcgatcaagagga
tttgggtttgtttcattccgaaaccagaaggatgctcaaagtgcaattaatgacttaagt
ggaaagtggcttggtagtcggcagatccgttgtaactgggcaacaaagggtgctactagc
aatgatgacaagcaaagctctgatgctaaaagtgtggttgaactaaccaatggctcatca
gaggatggtaaagagaccaccaataatgaggcaccggagaataatcctcaatatactact
gtttatgtgggcaatcttgctccagaggtcactcaacttgaactccatcgtcacttccat
gctcttggtgctggggtgattgaggaggttcgggttcagcgtgacaaaggctttggcttt
gttagatacaatacacatgctggggctgctttggctattcagatggggaacactcagtca
tttctgtgtggcaagcaaattaagtgctcttggggcagcaaacctacaccacctgggaca
agttcaaatccacttcccccacctgcagctgcacctttacctggtctttcagcgattgac
cttttagcttatgagaggcagttggctatgagcaaagtgggtggcgttcatgccttaatg
caccctcagggacagcaccctctcaagcaggcagcaatgggagtgggtgctgctggcgga
agccaggctatatatgatgacggtttccagaatgttgctgctgcccggcagttattgtac
tatcagtaa
DBGET
integrated database retrieval system
