Hibiscus syriacus (Rose-of-Sharon): 120134094
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Entry
120134094 CDS
T09559
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120134094
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120134094
Membrane trafficking [BR:
hsyr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120134094
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120134094
Exosomal proteins of bladder cancer cells
120134094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
120134094
NCBI-ProteinID:
XP_039006500
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
MSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEHPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLKKKTASPVDDILR
LSQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLILSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHSKQDIIISNSEDKSIRVWDGTKRTGLQTFRREHDRFWILAIHP
DMNVLAAGHDSGMIVFKLERERPAFAVSGDSLFYSNDRFLKYYDFSTQRESQALTIRRPG
STTLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDNIGRGDSLQEAKKGLGSSAIF
VARNRFAVLDKGNNQVLIKNLKNEVVKKSGLPVPTDVIFYAGTGNLLCRSEDRVVIFDLQ
QRLVLGDLQTPFVRYVVWSNDMESVALLSKHTIVITNKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDCGIIRTLDVPIYITKVSGNTIFCLDRDGKNKIIVIDSTEYI
FKLSLLQKRYDHVMTMIRNSQLCGEAMIAYLQQKGFPEVALHFVKDEKTRFKLAIESGNI
QIAVASAKEIDDKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLINGNLEKLSK
MLKIAEVKNDVMGQFHNALYLGDIRERVKILENAGHLPLAYITASIHGLQDVAERLASEL
GDDVPPLPEGKEPSLLMPPVPVMCGGDWPLLRVMKGIFDGGLDSIGRGAVDEEEEDARGD
WGEDLDVVDVDGLQNGDVTEILVYGEVTEENEEEEGGWDLEDLELPPEIDTPKVSGGARS
SIFVAPTPGMPVSQIWIQKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFAPLKSMFLDLHT
GSHSYLRAFSSAPVVSLAIERGWNESASPNVRCPPALVFNFSQLDEKLKAGYKATTAGKF
TEALRLFLSILHTIPLIVVESRREVDEVKELIIISKEYVLGLQMELKRREMKDNPVRQQE
LAAYFTHCNLQMPHLRLALQNAMVVCSKAKNWATAGNFARRLLETSPTNENQAKAARQVL
QAAERNMTDAAQLNYDFRNPFVTCGATYVPIYRGQKDVSCPYCTARFVPSQEGQLCTVCD
LAVIGADASGLLCSPSQIR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagttcgagacgaagagtaatagagtgaaagggctgagtttccactctaag
aggccgtggatcttagctagtctccacagtggtgttatccagttatgggactatcgaatg
ggcactctgattgatcggttcgacgaacatgatggccctgttcgcggcgtccatttccac
atgtctcagcctttgtttgtctctggaggggatgactacaagattaaagtctggaactac
aagttgcatagatgtcttttcacacttcttggacatcttgattatattcgtactgtgcaa
tttcatcatgagcatccatggattgtgagtgccagtgatgatcagactattcgcatttgg
aactggcagtcacgaacttgcatctcagtcttgactggtcataatcattatgttatgtgt
gcgtcattccatcctaaagaagaccttgttgtgtcggcctctcttgatcagactgttcga
gtttgggatattggttccttgaaaaagaagactgcctccccagttgatgacattttacgg
ctgagtcagatgaactcggatctttttggtggtgttgatgcaatagttaagtacgtattg
gaaggtcatgaccgaggagtaaattgggctgcatttcatcccaccctacctttgatactc
tctggagcagatgatcgccaagtcaaattgtggcgtatgaatgatacaaaggcttgggaa
gtagataccttgagaggacacatgaacaatgtttcatgtgttatgttccattccaaacaa
gacattattatatctaattccgaggataaaagcattcgtgtgtgggatggaacaaagcga
actggacttcaaactttccgtcgagagcatgacagattctggatacttgctattcatcct
gatatgaatgttttagcagctggacacgacagtggcatgattgtatttaagctagagaga
gagcgtcccgcttttgcagtgagtggtgattcactgttttattccaatgatcggtttctt
aagtattatgacttttcaactcagagagaatcacaggcacttacaattcgtcggcctggt
tccacaactctgaatcaaagtccaagaacactttcttacagtcctacagaaaatgctgtt
cttatatgctcggatgtggatggaggatcttatgagttgtatgtgataccaaaagacaac
attggtcggggtgacagtttgcaggaggcaaagaaaggtctgggtagttctgctatattt
gtggctcgaaaccggtttgctgtccttgacaaaggaaacaaccaagtattaatcaagaat
cttaaaaatgaagtggttaaaaagagtggcctcccagtgcctacggatgtgatattttat
gctggaactggtaatttgttgtgtaggtcagaggatagagtagttatatttgatctccag
cagaggcttgttcttggtgatcttcaaaccccttttgtgaggtatgttgtttggtctaat
gacatggagagtgttgctttgctcagcaagcataccattgtcattactaacaagaagctt
gtgcaccagtgcactctccatgagacaatacgtgttaagagtggagcctgggatgacaat
ggtgtttttatttacaccaccctaaaccatataaagtactgccttcccaatggggattgt
ggaataattcgaacgcttgacgttccaatttacataaccaaggtttctggaaatacaata
ttttgcctagatcgtgatgggaagaataagattatagtcattgattctacagaatacatt
ttcaagctttctctgcttcagaagagatatgatcacgttatgactatgataagaaactcc
cagctttgcggtgaggccatgattgcttatctgcaacagaaggggttccctgaagtggca
cttcattttgtcaaagatgagaaaacacgctttaagttggctatagagagtgggaacatt
caaattgctgttgcatccgctaaggagattgatgacaaagatcattggtataggttgggt
gtggaggcccttcgccaaggcaatgctggtatagttgaatatgcctaccagaggacaaag
aactttgagaggttgtcttttctttatctcataaatggtaacctggaaaagttgtccaag
atgctgaaaattgccgaagttaagaatgacgttatgggtcaatttcacaatgctctgtat
cttggtgatatccgggaacgtgttaagatcttggagaatgctggtcacttgcctcttgct
tatattacagcatcaattcatgggctacaggatgttgcagaaaggttagcatctgagttg
ggcgatgatgtccctcctttgccagaggggaaagaaccttccttgttgatgcctccggtc
ccggttatgtgtggtggtgactggcctcttctgagagtcatgaaaggcatatttgatggt
ggattagatagtattggcaggggtgctgtggatgaagaggaagaggatgcaagaggcgat
tggggtgaagatcttgatgtggttgatgttgatggcttacagaatggggatgttactgaa
attttggtgtatggggaagtgactgaagaaaatgaagaggaagagggtggatgggacctt
gaagatttggaacttcctcctgagatagacaccccaaaggtttctggtggtgctcgatct
tctatttttgtggcaccaactcctggtatgcctgtaagtcagatttggattcagaaatca
tctcttgccgctgaacatgcagcagctggtaattttgatacagcaatgcggttgctgagc
aggcaacttggcataaaaaactttgctcctttgaaatccatgtttcttgatcttcacaca
ggtagccatagctatcttcgtgcattttcatctgcaccagtggtgtccttggcgattgag
aggggatggaatgagtctgctagtcctaatgtgaggtgtccacctgcccttgttttcaat
ttttctcagttggatgagaagctgaaggctggttacaaggccactacagctgggaaattt
accgaggctcttcggctcttcctcagcattcttcacacaattccactgattgttgtggag
tcaaggagggaagttgacgaagtaaaggagttaattattatttctaaggagtatgttctc
ggtctgcaaatggagcttaaacgaagagaaatgaaagacaatccagtgcgacaacaggag
cttgctgcatacttcacccactgtaaccttcaaatgcctcacctaagacttgctctgcaa
aatgcaatggttgtctgctccaaggcaaagaactgggctacagccggtaactttgccagg
cgactactagaaacaagccccacaaatgagaatcaagcaaaggctgctaggcaagtgctt
caagcagctgagaggaatatgacggatgctgcccagctgaactacgatttcagaaaccca
tttgtgacatgtggggcaacttatgtgccaatttacagaggacagaaggatgtatcttgc
ccgtattgcactgctcgctttgtgcctagccaggaagggcaattgtgcacggtgtgtgat
cttgcagtgattggggcagatgcttcaggattgctatgttctccttcgcagatacgatga
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integrated database retrieval system
