Hibiscus syriacus (Rose-of-Sharon): 120135716
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Entry
120135716 CDS
T09559
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120135716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120135716
Ion channels [BR:
hsyr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120135716
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
120135716
NCBI-ProteinID:
XP_039007867
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All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MHCSLVSRPSLLLPSRCRRPGCMQIDLGLGIVVTFFRCVADLFFFVHITVKFRTAFVAPN
SRVFGRGELVMDRKAIAIRYLKSSFIIDLAAALPLPQIVIWFIIPKSGMAAHANHTLSFI
VLLQYIPRFIIMFPINQRIVKSTGVVAKTAWSGAVYNLVMFILASHVLGASWYVLSTQRQ
YDCWSLECTKEMNETHSPSCNHDFLDCSTVGKPARNAWLKKTNVIMNCDALNDDNKDFEF
GMFAEPYEHVASSAFMDKFFYCLWWGLKSLCSYGQSIETSTLPSETLFCALICIAGLVFF
SHLIGNMQSYLQSTTARLEEWRIRRRDTEEWMRHRQLPPDLQDRVRRFVNYQWVATRGVD
EEAILKALPLDLRRQIQRHLCLALVRRVPFFNQMDDQLLDAICERLVSSLNTKDMYLVRE
GDPVREMLFIIRGEVESSTTNGGRTGFYNSITLGPGDFCGEELLTWALIPNSDSCLNLPL
STRTVKSITEVEAFALRAWELKYVAKQFKRLHSKKLQHAFRYYSHQWRTWGACFIEAAWR
RYKRRKMAIELAKQENLFDDGGEGVLVGAGEEEDEDGSSDTSHQAQHLGVTLLASKFAKN
TRRGAKKVMARISHDESMLKMPKMFKPVEPDFSAL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtagccttgtttctagaccctctctacttttaccttcccgttgtcggcgcccc
ggctgcatgcagatcgatctcggcctcggcatcgtcgtcaccttcttccgttgcgtcgcc
gacttgttctttttcgtacacatcaccgtcaagttcaggacagctttcgtggcacccaat
tctagggtcttcgggaggggagagctcgtaatggatcgaaaagccatcgccattcgatac
ttgaagtcgagtttcatcattgatcttgccgctgctctccctctccctcagattgtcatc
tggttcataattccgaaaagcggaatggctgctcatgcaaaccatacactttctttcatc
gttctccttcaatacattcctcgattcataatcatgtttccgatcaatcaacgcatcgtc
aaaagtaccggagtcgtcgccaagactgcctggtcaggggcagtttacaacctcgtcatg
ttcatcctagctagccatgtcttaggagcttcatggtatgtcttgtcgactcaacggcag
tacgattgctggagtttagaatgcacgaaagagatgaacgagacgcattcgccatcctgc
aatcatgacttcctcgactgtagtaccgtcggaaagcctgcacggaacgcctggctcaag
aaaaccaacgtgatcatgaactgcgatgctctgaacgacgacaacaaagacttcgagttc
ggaatgtttgccgagccttacgaacacgtcgcgtcgtcagcgttcatggataagttcttt
tattgcctttggtggggattgaaaagcttatgttcatatggacaaagtattgagacaagt
actcttccttctgaaactttattttgtgctcttatttgcatcgctggtctagttttcttc
tcacatctcataggcaacatgcagagctatcttcaatctactacagcaagactagaggag
tggagaatccgccgaagggataccgaagagtggatgagacaccgacaattgccgccggat
ttgcaagaccgtgtccgccggttcgttaactatcaatgggttgccacgagaggcgttgat
gaagaagctatattgaaggccttacccttggacctccggcgtcaaattcaacggcatctt
tgtctcgcccttgttcgccgtgttccatttttcaatcagatggatgaccagctcctagat
gccatatgtgaacgccttgtctcctccttgaacaccaaggacatgtaccttgtccgggaa
ggtgatccggtgcgcgagatgcttttcatcattcgaggcgaagtcgagagctcgacgacc
aatggcggccggacggggttctacaattccataacactcggaccaggtgacttctgtggt
gaagagttgttgacatgggccttgatcccgaactccgactcctgcctaaaccttccgtta
tcgacccgaacggtgaagtcgataacggaggtcgaggccttcgctctccgcgcctgggag
ctcaaatacgtggcgaaacaattcaagcgactgcatagcaagaaacttcaacacgcattc
agatactactcccaccaatggaggacatggggagcttgcttcatcgaagctgcttggaga
cggtacaagaggagaaagatggcgattgagctagcgaaacaggagaacttgttcgacgat
ggcggcgagggagtattagtcggtgccggagaagaggaggacgaagatggatcatcggat
accagccatcaggcgcagcatcttggtgtcacgctactggcatctaaatttgctaaaaac
actaggagaggagcaaagaaggtgatggccaggattagccatgatgaatccatgttaaaa
atgcccaaaatgtttaagcctgtggagcctgatttctctgccctgtaa
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