Hibiscus syriacus (Rose-of-Sharon): 120136128
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Entry
120136128 CDS
T09559
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120136128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120136128
03009 Ribosome biogenesis [BR:
hsyr03009
]
120136128
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120136128
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 related factors
120136128
Complex B
120136128
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Helicases
120136128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
120136128
NCBI-ProteinID:
XP_039008174
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MGRGGDVGHGHVVDRRSDSIRGREVGHGGGGRGGRGGGGRGYGGRHGGSSRGDLDNVSLP
RQNFGNLVPFEKNFYRESSAVREMTEQEIMLYRRTREISVQGHDIPKPIRMFRDANFPDY
CLEVIAKLGFVEPTPIQAQGWPMALKGKDLIGIAETGSGKTLAYLLPALIHVIAQPRLVH
GDGPIVLILAPTRELAVQIQGEAAKFSTRANIRSTCIYGGAPKGPQIRDLKRGVEVVIAT
PGRLIDMLEVQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPK
EVESLARQFLCNPYKVIIGSPDLKANQSINQVVEIITEMEKYNRLVKLLKEVMDGNRILI
FMETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLD
VKDIKCVINYDFPTSLEDYVHRIGRTGRAGAKGTAFTFFTQANARYARDLIKLLQDAGQV
VSPALSTLARSAPSKFGGSGGNFSSRGRGSFGNRSLISGSNYVSLGGKKRPW
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggtggggacgtcggtcatggacatgttgtagacaggagaagtgacagtata
agaggtcgtgaagtcggccatggtggtggggggagaggtggccgtggcggcggcggaagg
ggttatggagggaggcacggagggtccagtagaggggatttagacaatgtttcacttcct
aggcaaaattttggaaatctggttccttttgagaagaacttttatagggagagttctgca
gttcgagaaatgacagagcaagaaataatgctttatcgtagaacaagggagatttcagtt
caaggacatgatattccaaaaccgataaggatgttccgtgatgctaatttccctgattat
tgtcttgaggtgattgctaaattgggttttgttgagccaactccaattcaagctcagggc
tggcctatggctttgaagggtaaagatctaatcgggattgctgagactggttctggaaaa
actctggcatatttactgccagcattgattcatgttattgcacagccacgattggttcat
ggtgatggtcctattgtattaatattagcacctacgagggagttagctgttcaaattcaa
ggagaagctgcaaagttttctacgcgtgctaatataagaagtacctgtatctatggtggt
gctcctaagggaccacaaattagggatcttaaacgaggtgtcgaggttgtaattgctaca
cctggtcgactgatagatatgctagaagttcaacacacaaacttgcaaagagtgacttac
cttgttctggatgaggctgatagaatgctggatatggggtttgagcctcagataagaaaa
attgtatctcagatccggcccgatagacaaacattgtactggagtgcaacatggccaaag
gaagttgaatcattagcaaggcagtttttatgcaacccatacaaggttattattggatca
cctgatctgaaagcaaaccaatctattaaccaagttgttgaaatcataacagagatggaa
aagtacaacaggctagtcaaattgctgaaagaagtgatggatggtaatcggatactcata
ttcatggagacaaagaagggatgtgaccaagttactagacagctcagaatggatggatgg
cctgccctgtccatccatggtgataaaaatcaggccgaaagagattgggtcctggctgaa
tttaaaagtggcagaagtcctataatgactgccactgatgtggctgcacggggacttgat
gtaaaggacataaagtgtgtaatcaactatgattttcctaccagtctggaggattatgta
cacaggattggtagaactggacgagcaggggccaaggggactgcttttactttcttcaca
caggcaaatgcaaggtatgctagggaccttatcaagctcctacaagatgcggggcaggtt
gtctcccccgcattgtccacattggctcgctctgcaccttcgaagtttggaggttctgga
ggaaacttcagctccagaggacgtggcagctttggtaaccggtctttgatatcaggatct
aattatgtatctcttggtggaaagaagaggccctggtag
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