Hibiscus syriacus (Rose-of-Sharon): 120136239
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Entry
120136239 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120136239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120136239
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120136239
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120136239
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120136239
Chromatin remodeling factors
BAF complex
120136239
PBAF complex
120136239
GBAF(ncBAF) complex
120136239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
QLQ
ResIII
DEAD
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
120136239
NCBI-ProteinID:
XP_039008270
LinkDB
All DBs
Position
Unknown
AA seq
2143 aa
AA seq
DB search
MQSGGGGGGPSRNPGVGPVGRTASTSSAASPTSSSSAVSAPHFGFDSAQQQQQQIASRQS
LQQQLFRKPEGNDAILTYQASGLQGMMGGSNFPSSPGSMQPPQQSRKFFDLAQQHASAQD
SQHRNQAVEKQKLNPVQQAYYQYAYHIAQQQQTLLAQQQAKTAMMGSVSAKDQDMQIGNL
KMQELVSMQVAKQTQASSSKNTSEQFGRVEKQMEQGAVSASEHRNELKAPAQAAVTEKSM
PVNVLRAMQAQQAQQTVQNTGNNQLVMAAQLQAWALERNIDLSQPANANLMAQVLMQSKM
AAQQKANESSMASQSSPMHVSKQQVSSPSVPSESSLRGNASNDITAQSGLAKTRQTSIPG
PFCSTSSSGVVNNANNIAMQQLAIHGRDNQVPLRQMVLHGNGTSLMQPPQSSANSSQSAD
PSXADKKSLGGTGTPQTQYIKQLNRSSPLPADPNNDGGSLTNSPSQGGAATKIPQQNSGF
TKQQLHVLKAQILAFRRIKKGERTLPQELLQAIVPPPLEVQQLQFPPVGGNIQDRNGGKG
IEDQVKHLESKEKVLQAGPSTNGQNATKEDAYAGDDKTTASIAHMQDVSATAKGFSSTLH
AGKEEQQSSVFPAKSDREVERGLPKTPVTSDFSTERGKTVAPEVAASDGGQIKKPAQVKS
APPQPKDLGSARMYHGPLFDFPFFTRIHNSYGSAMPNGNNNLTLAYDVKDLLFEEGIEVL
SKKRSESLRKIGGLLAVNLERKRIRPDLVLRLQIEEKKLRLIDLQARLRDEVDQQQQEIM
AMPDRPYRKFVRLCERQRMELARQVQATQKALREKQVKSIFQWRKKLLEAHWAIRDARTA
RNRGVAKYHEKMVREFSKRKXDDRNKRMEALKNNDVERYREMLIEQQTSMTGDAAERYEV
LSSFLTQTEEYLHKLGSKITTAKNQQEVEDAANAAAVAARLQGLSEEEVRVAAACAGDEV
MIRNRFMEMNAPKDGSSVSKYYNLAHAVNERVIRQPSMLRAGTLRDYQLVGLQWMLSLYN
NKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHNWLPSLS
CIYYVGGKDQRSRLFSQEVLAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDR
ESVLARDLDRYRCQRRLLLTGTPLQNELKELWSLLNLLLPEXFDNRKAFHDWFSQPFQKE
GPMHSAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSVVLKCRMSAIQS
AIYDWIKSTGTLRADPEDEKLRVQKNPLYQARVYKILNNRCMELRKTCNHPLLNYPFFND
LSKDFLIKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGT
TSLEDRESAIVDFNSPDSECFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVAR
AHRIGQTREVKVIYMEAVVDKISSQQKEDELRSRGTVDFEDDFAGKDRYMGSIESLIRNN
IQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHQVNRMIAR
SEEEVDLFDQMDEELDWIEEMTCHEQIPKWLRASTKEVNTTVATLSKKPSKNILFTAGVV
GVSNETETERTRGRPKGKKRLNYKEIEDTNGEYSEASSDERNGYSANDEEGETGEFEEDE
LSGAVGALPVNKEQSEEDGPLGDNGYEYDQTSEHIRNNRVLEESGSSGSSLDSQRPIQMV
SPVSPQKFGSLSALDSRPSAVARRLHDELEEGEIALSGDSHMDHQQSESWIHDREEGEDE
QVVQPKIKRKRSIRVRPRHTMERAKKSFTEVPHFQRGESSLFPSQLDHKYQLQLRIDTET
NPTRERNAFRHDPNDSSSKTKRNLPSRKIADTSKLHASPNSGRVSMAATSENVGEPSREN
WDSKLVNTSGLSNFGGKMSDVIQRKCKNVISKLQRRIDKEGQQIIPLLTDLWKRIENSGY
MVGSGTNHLDLRKIDQRVDRLEYSGVMELVSDVQLVLKSSMHFYGFSHEVRSEARKVHDL
FFDLLKIAFPDTDFREARNALAFSGPVSTSVSGPARQVAVGKMQKSINEVESDSSLTQRH
YSADPLMLVRTQGLKCICPKRNQGLGKEAVLPGNNINIMMILF
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggtggtggtggaggtgggcccagccggaaccctggggtgggtccggttggg
cggaccgcgtccacatcgtctgcagcttcgcccacttcctcgtcatcggccgtttcagcc
cctcacttcgggtttgattcggcgcaacagcaacagcagcaaatagcgtctaggcagtca
ttacaacaacaattgtttagaaaacctgaaggaaatgatgccatcctaacatatcaagcc
agtggtcttcaaggtatgatgggtggaagcaattttccttcatctccaggctccatgcaa
ccacctcaacaatccaggaagttttttgatctggctcaacaacatgcttctgcccaggac
agccagcataggaatcaagctgttgagaaacaaaagctgaatcctgttcagcaagcttat
tatcagtatgcttaccacattgctcagcaacaacaaacgcttttagcacaacaacaagct
aagacggcaatgatgggctctgtatctgctaaggatcaggacatgcaaattggaaactta
aaaatgcaggaacttgtttccatgcaggtagctaagcagactcaggcatcatcctctaag
aacacatctgagcagtttggtcgtgttgaaaagcagatggagcaaggagcggtgtcagct
tctgagcacagaaatgagctcaaggcacctgcacaggcagcagttactgaaaaatcaatg
cctgtaaatgttttaagggcgatgcaggcccaacaagctcagcaaactgttcaaaacaca
ggaaacaatcaacttgttatggctgcacagctgcaggcatgggcacttgagcgtaatatt
gatctgtcgcagcctgcaaatgccaacttgatggcacaggtactcatgcaatctaagatg
gctgcccagcaaaaagcaaatgaaagcagcatggcttctcagtcatcacccatgcatgta
tccaagcagcaggtctcttctccatcagttccaagtgagagttctctccgtggtaatgca
tctaatgatataactgcccagtctggccttgcaaaaaccaggcagacaagtataccgggc
cctttttgctcaacttccagctctggggtggttaacaatgctaacaacattgcaatgcaa
cagttggctattcatggccgagataatcaagtgcctctgaggcagatggttttgcatgga
aatgggacgtctcttatgcaacctccacagtcatctgcaaatagtagccagagtgctgat
ccatctnttgctgacaaaaaatcattaggtggaactggaacaccgcaaacacagtatatc
aaacaattaaatcgatcttctccactgcctgctgatcctaataatgatggaggatcactt
accaactcaccatcacaagggggagcagctaccaagatcccccagcaaaattccggtttc
actaaacaacaacttcatgttctcaaagcacaaatactagcatttaggcgcattaagaaa
ggagaacgaacacttccacaggaacttcttcaagccattgttcccccaccacttgaggtg
cagcagctccaatttcctcctgtaggtggaaatattcaggacagaaatggtggaaagggt
atagaagatcaagtgaaacatttggagtctaaggagaaagttttgcaagctgggccatct
accaatggacagaatgctactaaagaggatgcttatgctggagatgataaaactactgca
tcaatagctcatatgcaagatgtgtcagccactgccaagggattttcttctactttacat
gctggaaaagaagaacagcaaagttctgtctttcctgcaaagtctgaccgagaggtagaa
cgtggtcttccaaaaactccagtcacaagtgattttagtacagagagaggaaagactgtt
gcaccagaagttgctgcatctgacggagggcaaattaagaaacctgcacaagtaaaatct
gctcccccccagccgaaagatcttggctctgccagaatgtaccatggaccgttatttgat
tttcccttcttcactaggatacacaattcatatggctcagctatgcctaatggcaacaat
aatctgactttggcatatgatgtcaaagatcttctctttgaggaaggcattgaagtcctt
agcaagaaacgatcagaaagtttaaggaaaattggtggcttattagcagtaaatttggaa
aggaaaaggattaggccggatcttgttctgcgactgcaaattgaagaaaaaaagcttcga
cttatagatctgcaagcacgtttaagagatgaggttgaccagcagcaacaagagataatg
gcgatgcctgacagaccatacagaaaatttgtccggctgtgtgagcgtcagcgtatggag
ttggccagacaagtacaagccactcagaaggcccttagagagaaacaagtgaaatccatc
tttcagtggcgtaagaagctcttggaggctcactgggccatccgtgatgctcgaactgct
cgtaacaggggagttgccaagtaccatgagaaaatggtacgggagttttcaaagagaaaa
nntgatgataggaataaaaggatggaggccttaaagaataatgatgtcgaaaggtacaga
gagatgttgattgagcagcagacaagtatgactggtgatgctgctgagagatatgaagtt
ctttcatcattcctgacgcagactgaagagtatcttcataaattgggaagtaagataact
acagccaagaatcagcaggaagtggaggacgcagcaaatgctgctgctgttgctgcacgg
ttgcagggtctatcagaagaagaagttagggttgcagcagcttgtgctggagatgaagta
atgataagaaaccggtttatggaaatgaatgcacctaaggatggttcatctgttagcaag
tactataatcttgcacatgcggtgaatgaaagagtcataaggcaaccatcaatgctacga
gccggaacattacgagactatcagcttgttggtttacaatggatgctttctttgtataat
aataaactaaatggtatcttggcggatgagatgggtcttgggaagactgttcaggttatg
gcattgattgcgtatttgatggaattcaagggaaactatggtccacatcttattattgtc
ccaaatgctgttatggtaaattggaagagtgagctccataactggttgccgtctttgtca
tgcatctattatgttggaggaaaagatcagcgttcaagattattttctcaagaggttctg
gcaatgaaatttaatgtcctcgtgacaacttatgaattcatcatgtatgatcggtcaaaa
ctttctaaaattgattggaagtacatcataattgatgaagcacagcggatgaaagacagg
gaatctgttttagctcgtgatcttgatagataccgctgccagaggcggttacttcttact
gggacaccattacagaatgagttgaaagaactctggtcactattaaatcttctccttcct
gaangttttgataatcgcaaggcatttcatgattggttttcacaaccatttcaaaaggaa
ggccctatgcatagtgcagaggatgattggcttgagacggagaagaaggttatcatcatc
caccgacttcatcaaattctagagccttttatgcttagacgtcgtgttgaggatgtggaa
ggttcccttcctccaaaggtctcagtagttttaaaatgcagaatgtcagctattcagagt
gccatttatgattggataaagtcaactgggactcttcgagctgatcctgaagatgagaag
ctcagggttcaaaaaaatccgctataccaggctagggtgtacaaaattttaaataaccgg
tgtatggagcttcggaagacttgcaatcatcctttgctcaattacccatttttcaatgac
ttatccaaagatttccttataaaatcttgtgggaaattgtggatactagacaggatccta
ataaaactgcagagaactgggcatcgtgtattactctttagtaccatgacaaagcttctg
gatatcttggaggaatacctgcagtggaggaggcttgtctacagacgtattgatggaaca
actagcttggaagatcgtgaatcagctattgttgacttcaatagccctgactctgaatgc
tttatattcttactaagtattcgtgcagctggacgaggtctaaatcttcagtctgctgac
actgttgttatatatgatcctgatccaaatcctaaaaatgaggaacaggcagttgcgagg
gctcaccgaattggacaaacaagggaagtcaaagtcatttacatggaagcagttgttgac
aaaatttctagtcagcaaaaagaggatgaactaaggagtcgaggtacggttgattttgag
gatgattttgccggtaaggatagatatatgggatctattgagagcctcataaggaataac
attcagcagtataaaattgacatggctgatgaagtaattaatgctggccgttttgatcag
agaacgacacatgaagagagacgcatgactttggaaacattattgcatgatgaggagagg
tatcaagaaactgtccatgatgttccttcattgcaccaggtgaatcgcatgatagcaaga
agtgaagaagaagttgatttgtttgatcagatggatgaagagctggattggatagaggag
atgacttgccatgaacagatacctaagtggcttcgagccagtacaaaagaagtgaatact
actgtagctactttatcaaaaaaaccatcaaagaatattttgtttactgctggtgttgtt
ggtgtctcaaatgaaacagagacagagagaacacgggggcgacctaagggaaaaaagcgt
cttaactacaaggaaatagaggatactaatggagaatactctgaggcaagttctgatgag
agaaatggctattctgctaatgatgaagagggagaaactggtgaatttgaagaagatgaa
ttaagtggtgctgttggtgcgctgcctgtaaataaggaacagtcagaagaagacggccca
cttggtgataatggttatgagtatgaccagacttcagaacacattagaaacaatcgtgta
cttgaagaaagtggttcttcaggatcatcattagacagtcagagaccaatacagatggtg
tctcctgtttctcctcagaaatttggatctctctctgcattagactctaggccgagtgct
gttgcaagaaggctgcatgatgaacttgaggaaggtgaaattgcgttatctggagattct
cacatggaccaccagcaatctgaaagttggattcatgatcgggaggaaggtgaagatgaa
caagttgttcaacccaagataaaacgaaagcgtagtatccgggttcgacctcgtcacact
atggaaagggcaaagaaatctttcaccgaagtgcctcatttccaacgtggagaatcatct
ttgtttccttcacagctggaccataagtaccaattacaactgaggattgatactgaaaca
aacccaactcgtgagcgtaatgctttcaggcatgatccgaatgattcatcttctaaaact
aagaggaacttaccttcaagaaaaatagctgatacatctaagttgcatgcgtcacccaac
tctggtcgagtgagcatggctgctacttcggaaaatgttggtgaaccctccagggagaat
tgggacagtaaactggttaatacaagtggtttgtcgaattttggtgggaagatgtctgat
gtcatccaaagaaagtgcaaaaatgtgattagcaagcttcagaggagaatagataaggag
ggccaacagattataccacttttaacagatttgtggaagaggattgaaaactcgggctac
atggttggaagtgggactaatcatttggatttgcggaagattgatcagcgtgttgataga
ttagagtacagtggagttatggagcttgtttcggatgtgcagttggtactaaaaagttct
atgcatttttatgggttttcacatgaggtcagatctgaagctaggaaagtacatgatctg
ttttttgacttgttgaagattgcatttccggatacagatttcagagaagctagaaatgca
cttgctttctctgggccagtatctacctccgtctctggtcctgctagacaggtagcagtt
ggcaagatgcagaaatcgataaacgaggtggagtctgattcaagcctcactcaaagacat
tacagcgcagatccactcatgctggtgaggacgcaagggttaaagtgcatatgccccaaa
aggaatcaaggcttgggaaaggaagcagtattaccagggaacaatatcaacataatgatg
attctcttctaa
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integrated database retrieval system
