Hibiscus syriacus (Rose-of-Sharon): 120136470
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Entry
120136470 CDS
T09559
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120136470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120136470
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
120136470
Prokaryotic type
Archaeal type
TFB
120136470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DmmA-like_C
A2L_zn_ribbon
HTH_Tnp_ISL3
Zn_ribbon_8
DUF7573
zinc_ribbon_6
Motif
Other DBs
NCBI-GeneID:
120136470
NCBI-ProteinID:
XP_039008430
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MGDVYCSDCKRQTEVVFDHTAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGVSGEFLSSSLGRWQNRGSNPDRGLIVAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNKQAVKAAQESVQKSEDF
DIRRSPISISAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNAYKDLHSHLEKIIPNWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtttattgttcggactgcaagcggcagacggaggtggtcttcgaccacacg
gccggcgacacggtgtgttcggagtgcgggttagttttagagtcacactcgatcgacgag
acgtcggagtggagaactttcgcaaacgagtcgggcgataacgatcctgtccgtgttggt
ggccccaccaacccgcttttggcggatggcggtttatccactgtaatcgctaagcctaac
ggtgtttctggcgagttcctctcgtcttccttgggccggtggcagaaccgtgggtcgaat
ccggatcgggggttgattgttgcttttaagaccattgctaccatgtctgacaggttgggc
ctagttgcaaccatcaaggaccgagccaatgagatatataagaaggtggaagatcagaag
tctagcagaggaagaaatcaggatgcattgttggctgcttgcctatatattgcttgtaga
caagaagacaagccacgcactgtcaaggaaatttgttctgttgccaatggagccaccaag
aaagagattggccgagctaaagaatacatagtgaaacaacttggactggaaaatggccag
tctgtggagatgggaaccatacatgctggtgacttcatgaggcggttttgttccaacctt
ggtatgaataaacaagcagttaaagctgcccaagaatcagttcagaagtcggaggatttt
gatataaggcgaagcccaatatcgatttcagctgctgttatttatattataacacagctt
tcagatgataagaagcctctaagagatatttcacttgctactggagttgcagaagggact
atccgaaatgcgtacaaggatcttcactcccatctggaaaagataataccaaattggtat
gccaaggaagaagatctcaagaatctatgtagtccttga
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