Hibiscus syriacus (Rose-of-Sharon): 120136662
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Entry
120136662 CDS
T09559
Name
(RefSeq) WD repeat-containing protein 36-like
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120136662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120136662
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120136662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR75_2nd
NBCH_WD40
PEP5_VPS11_N
WDR54
WD40_like
Beta-prop_IP5PC_F
TAF1C_beta-prop
WD40_RFWD3
Beta-prop_LRRK2
WDCP
Utp12
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
120136662
NCBI-ProteinID:
XP_039008554
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MGIFEAYRAIGYITSGVPFSVQRLGTETFVTVTVGKAFQIYNCSKLNLVLIGPQLSKKIR
ALASYRDYTFAAYGTDIAVFKRAHQVANWSRHSAKVNLLLLFGDHILSVDADGNVFIWSF
KGIDENSAPIGHIKLDAKFTPTCIMHPDTYLNKVLVGSQEGSLQLWNISTKKKLYEFKGW
NLGVCSCVSSPALDVIAVGCADGTIHVHNIRYDEEVVTFKHSARGTATALSFSTDGQPLL
ASGGSSGVISIWNLEKRRLQTVIREAHESSIISLHFFANEPVLMSSSADNSIKMWIFDTS
DGDPRILRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSTIQDQQSRELSQGHISKR
AKKLRMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTEQAYVWRLQNFVIGEHILRPY
PEDPTPVKACAISACGNFAILGTAGGWIEIFNLQSGISRGSYLDRPKESAHDGEVIGVAC
DSTNTLMISAGYHGDIKVWDFKGRYIKSRWEIGCAVVKIVYNRLNGLLATVTDDFVIRVY
DVVASRMVRKFEGHTDRITDLCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVAIS
ALSLSPNMDVLATTHVDQNGVYLWVNRSIFSGAPNVDSFASGKEVVNIRLPSISSVDGSQ
LEDSDEPVTDNSVPKDASVSATFIKQIPELVTLSLLPKSQWQSLINLDIIKVRNKPIEPP
KKPEKAPFFLPSASSLSGEILFMPSEANGNNDAKGNKAENNDRKLDMPPSAFLQLLQSSA
EIKNFSAFTDYIKALSPSALDMELRMLQIIDDENLEELDRKPEMISIELLLDYFVSELSY
RNNFEFIQAVIRLFLKIHGETIRRRPEFLHEAKKLLEIQTDVWQKIDTMFQQTRCMVTFL
GNSQF
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggggatatttgaggcatacagagcaataggatacataacaagcggagttcctttctcc
gttcagcgattgggcaccgaaactttcgtcactgtcaccgttggcaaagcttttcagatt
tacaactgctccaagctcaatctggtgctaattggtcctcaattatccaagaagattcga
gctcttgcttcgtaccgtgattacacgtttgccgcgtatgggacagatattgccgtgttt
aaacgagctcaccaggtagcaaattggagtaggcacagtgctaaagtcaacttattactt
ttattcggggatcacattctaagcgtagatgctgatggtaatgttttcatatggtcgttt
aaaggaattgatgagaattctgctccaattggacatatcaagctagatgccaaattcact
cctacttgtataatgcatccagatacttacttaaacaaggttcttgttgggagccaggag
ggttctttgcagctttggaacatcagcacaaaaaagaaactttatgaattcaagggatgg
aatttgggtgtctgcagttgtgtttcatcacctgcactagatgttattgctgttggttgt
gctgatggaacaattcatgttcataatatacgttatgatgaagaagttgtaacatttaaa
cattctgcaagaggcactgccactgccttatctttcagcacagatggacagccccttcta
gcatccggaggttcttctggcgtaataagcatatggaatcttgagaagagaaggcttcaa
acagtcataagagaggctcatgagagttcaattatttcacttcacttttttgctaatgag
cctgtattaatgagttcatcggctgacaactcaattaagatgtggatctttgacacaagt
gatggagatcctcgtatcttgcggtttcgaagtggacacagtgctcctccactttgcatc
aggttctatgccaatggaaggcatatcctgtctgctggccaagatcgtgcttttcgcctt
ttctctaccatccaggatcagcaaagcagagagctgtcacaaggtcacatatctaagcga
gccaagaaactaagaatgaaggaggaggaactaaaattaaagcctgttatcgcatttgat
tgtgctgaaatcagggaacgagattggtgcaatgtggttacatgccatatggatactgaa
caggcatatgtgtggagacttcaaaattttgtcattggtgagcatattctgagaccatat
cctgaagatcccacacctgtgaaggcctgtgcaattagtgcttgtggtaattttgctatt
ttagggacggcaggtggttggattgagatattcaatctccaatctggaataagtcgaggt
agttatctggacaggccgaaagaaagtgctcatgatggagaagtcattggagttgcatgt
gattctacaaataccttgatgataagtgcagggtatcacggagacattaaggtatgggat
ttcaagggacgctacataaagtctagatgggaaattggatgtgctgtggttaagattgtt
tacaatcgccttaatggtcttttggccacagtaacagatgattttgttattcgtgtgtat
gatgttgtggcatcaagaatggttcgtaaatttgaaggccatacagaccgtattactgat
ttatgtttcagtgaggatggcaaatggcttctatcatccggcatggatgggagccttaga
atttgggatgttatcttagcgagacaaattgatgctattcatgtcgatgtagctatctca
gcattgtccttgtcaccaaatatggatgttttagcaactacccatgttgatcagaacggg
gtttatctgtgggttaaccggtcaatcttctcgggagctccaaatgtggattcttttgca
agtggaaaggaagttgtaaacatcagattgccatccatctcatctgtggatggatcacaa
cttgaggattctgatgaacccgttacagacaactcagttccgaaagatgcttctgtctct
gcaacattcattaagcagattccagagctagttactctctcactattgccaaaaagccaa
tggcaaagcttgatcaatttagacattataaaggttcgcaacaaaccaattgaacctccc
aagaaacccgagaaggctcctttcttcctaccttcagcttcatctctttctggggagata
ttatttatgcctagtgaagctaatgggaataatgatgcaaaaggcaacaaagcggaaaat
aacgataggaaacttgacatgccgccatctgcatttttgcaacttcttcagtcctctgcg
gagataaaaaacttttctgcatttactgattatattaaagccttgtctccttcggccttg
gacatggagctccggatgcttcagatcattgacgatgagaatctcgaagagcttgatagg
aaacctgagatgatctcaatcgaactgttgttggattattttgtttctgagctatcctac
aggaacaactttgagttcatacaagctgttatcaggttatttctgaagattcatggcgaa
acgatacgacgccgtccggaattcctacacgaagcaaagaagctccttgaaatccaaacc
gacgtatggcagaagatcgatacgatgtttcaacaaacaagatgcatggttaccttcctc
ggtaattcacaattttga
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