Hibiscus syriacus (Rose-of-Sharon): 120136759
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Entry
120136759 CDS
T09559
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120136759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120136759
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120136759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
F-box-like
LRR_NXF1-5
F-box
LRR_RPS2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
120136759
NCBI-ProteinID:
XP_039008653
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MHKKMAFSFPAEVLEHVFSFIQLDKDRNSVSMVCKSWYEIERYCRWKVFVGNCYAVSPRM
VIRRFPEFRSIELKGKPHFADFNLVPDGWGGYVFPWIAEMVGALPWLEEIKLKRMVVTDE
SLELIAKSFKNFKALILSSCEGFSTDGLAAIASSCKNLKELDLRDCEGDDLSGLWLSHFP
NTYTSLVSLDISCLGSDEVCFTALERLVGRCTNLTTLRLNRAVPLDKIANILRHAPQLVE
FGTGSYTADLRPDVYSDLAGAFSSCKELKSLSGFWDVVPAYLPVIYPVCSKLTSLNLSYA
TLQSPDLIKLVSHCPNLQRLLVLDYIEDSGLEALTSSCKDLQELRVFPSDPFGADPNVSL
TEQGLVAVSSGCPKLQSVLYFCRQMSNEALVTIAKNRPNFTRFRLCIIEPTTADYLTHEP
LDVGFGAIVQYCKDLQRLSLSGLLTDRVFEYIGTYAKKLEMLSIAFAGDSDMGLHHVLSG
CESLRKLEIRDCPFGDKALLANAAKLETMRSLWISSCAVSFEACKLLGQKMPRLNVEVID
ERGPPDSRPESCPVDKLYIYRTIAGPRFDMPPFVWTMEDDTSWQHS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcataagaaaatggcgttttcgttcccagccgaggtgctggagcacgtattctcgttc
atacaattagataaagaccggaactcggtatcgatggtgtgtaaatcgtggtacgagatc
gagcgatattgtcggtggaaagtattcgtggggaactgttacgccgtgagccctcggatg
gtgatcagacggttccccgagtttagatccattgagctgaaagggaaaccgcacttcgcc
gacttcaatctggtgcccgacggatggggcggttatgtgttcccgtggatcgccgagatg
gtcggcgctctcccttggctcgaagagattaagcttaagaggatggtcgttaccgacgaa
agcttggagcttattgctaagtcatttaagaacttcaaagcgttgattctttcttcttgt
gaagggttttcaactgatgggcttgctgccattgcttctagttgcaagaatctgaaagag
ctggacttgcgagactgtgaaggggacgatttgagtgggctttggctcagtcattttccc
aacacatacacgtcgctcgtgtctctcgacatttcttgcttaggatccgatgaagtttgt
ttcacagccttggagcgcctggtgggcagatgtaccaaccttacgacgcttcggctcaac
cgtgcggtgcccctggataagatcgccaacattctacgtcatgcgccgcagctggttgaa
ttcggaactggtagctacacggctgatctacgaccggatgtctactcggatttggctgga
gcattttctagttgcaaggagctaaagagcttgtccgggttttgggatgtggtcccagct
taccttccagtcatttaccctgtctgctctaaattaacatcactcaacttgagctatgct
acgcttcaaagtcctgatcttatcaagcttgtaagccactgtccgaatttgcaacgccta
ttggtacttgattacattgaagatagtggtctcgaagcacttacatctagttgcaaggat
ttgcaagaattacgtgtgtttccatccgatccgtttggtgcagatccaaatgtttccttg
acagaacagggcctcgttgccgtatcttcaggttgtcctaagctacagtcagttctgtac
ttctgccgtcaaatgtctaacgaggcattagtcacgattgccaagaaccgtccgaatttc
acacgtttccgtctttgtataattgaacctacaacagctgattaccttacccacgagccg
cttgatgttggttttggagccattgttcagtactgcaaggatctccagcgtctttccctc
tctggtctccttacagatcgcgtgttcgaatatattgggacgtatgcgaaaaagctcgag
atgctgtctatagctttcgctggagatagcgatatgggactccaccacgtgctttctggg
tgtgaaagcctccggaaactagagatcagggactgcccctttggcgacaaggcacttttg
gccaatgctgcaaagctggagacaatgcgatccctttggatatcttcttgcgccgtgagc
tttgaagcatgtaagctgctaggtcagaagatgccgaggttgaatgtagaagttatagat
gagaggggacctccggattcaagaccagaaagctgcccggtcgataagctctacatatat
agaaccattgcagggccaaggttcgacatgcctccatttgtttggacaatggaagatgat
acttcgtggcagcattcttga
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