Hibiscus syriacus (Rose-of-Sharon): 120136775
Help
Entry
120136775 CDS
T09559
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Module
hsyr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120136775
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120136775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
120136775
NCBI-ProteinID:
XP_039008668
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MSLNTHCLPLLFTLISLSCCFSTGSYIEDPFRVGFRHGRAYHRPTSYHSYFRTFDHVHNK
RNYRNPYSANRFDYDAKVRGPTTPKIVNVDDFGTKANGADDSQAFEQAWKYACSSSQGAT
MVVPKQKIYRLKPINFSGPCKSPLILQIYGTIKATEDHSDYEDGGRRWLFFDKVQNLRVE
GGGTIDGSGRTWWEKSCKINEALPCKEAPTAVTFNECTNVRVSSLQITNAQQMHLTFQQC
VNVDAFNLQVKAPGNSPNTDGIHVTGTQNININNCVIGTGDDCISIVSGSKNVHATGITC
GPGHGISIGSLGAGNSAAFVSNVIVNKATLSGTSNGVRIKTWQGGSGYARNIKFQNIVMN
NVTNPIIIDQNYCDQQKTCRKQGSAVQVSDVLYQNIRGTSASGVAMKFDCSQSVPCRGIY
LQNVALRAEEDDNTQASCSNVRLSYTGDVSPPCSSQN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtccctaaacactcattgtctcccactcctgttcacattaatctctctgtcctgctgc
tttagcaccggcagttacatagaggacccatttcgcgtcggttttcgtcatggccgtgct
tatcaccgcccgacgtcctatcattcgtactttcgcaccttcgaccatgttcataacaaa
cgaaactaccgtaatccctactcggcgaaccggttcgactacgatgccaaagtgcgtggt
ccgacgactccaaagatagtcaatgtcgatgattttggaactaaagctaatggagcagac
gattctcaggcgttcgagcaagcttggaagtatgcatgttcatcttctcaaggagctact
atggtggtacctaagcagaagatttatcgtcttaagccaattaacttctcagggccttgc
aaatctcctctcatattgcagatctatggaacaatcaaagctaccgaggatcactcggat
tacgaagatggcggaagacggtggctattcttcgataaagttcaaaatttacgtgttgaa
ggcggaggcacaatcgacggcagcggtaggacatggtgggaaaagtcctgcaaaatcaac
gaagccctcccttgcaaggaagccccaactgctgtgaccttcaatgaatgcactaacgtg
agagtatcaagtctgcagataacaaacgcacaacaaatgcaccttacgtttcaacaatgt
gtgaacgtcgacgcgtttaatcttcaggtgaaagcaccggggaatagtccgaacaccgat
gggatccacgtgaccggaacccagaatattaacattaacaactgtgtcatcgggaccgga
gatgactgcatctcgatcgttagcggctcgaaaaatgtacatgcgaccggtataacttgt
ggtccgggccatggcatcagcattgggagcttaggagccggaaattctgcggcttttgtg
tccaatgtaatagttaataaagcgacactttcaggaacgtccaatggagtgagaataaag
acttggcagggtggatcgggatatgctagaaatatcaagttccaaaatattgtgatgaac
aacgtcactaaccctatcattattgatcaaaattattgcgatcaacaaaaaacatgtcgc
aaacagggttcagctgtgcaagtgagcgacgtgctttaccagaacataagaggaacgagt
gcctccggcgtggccatgaaattcgattgcagccagagcgttccttgccggggaatctac
ttgcagaacgtggctttaagggctgaagaagatgataatacacaagcttcgtgttctaat
gttaggttatcttatacaggagatgtttccccgccttgctcgtcacagaattaa
DBGET
integrated database retrieval system
