Hibiscus syriacus (Rose-of-Sharon): 120137017
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Entry
120137017 CDS
T09559
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120137017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120137017
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120137017
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
LRR_6
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
120137017
NCBI-ProteinID:
XP_039008826
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MESFELKRSKDSVNSDQSAHWSSFPDEVLERVLSRLKSHRDRSSASLVCKDWYHAERWSR
TNVFIGNCYSVSQEIVVRRFSRIRSVTLKGKPRFSDFNLVPENWGANIHAWLVVFAAKYP
FLEELRLKRMAINDQSLEFLAVSFPNFKALSLLSCDGFSTNGLAAIATHCKNLTELDIQE
NDIDDIGGSWLSCFPESFTSLEVLNFANLTSDINFDALEKLVGRCKSMRVLKLNRSVSLE
QLQRLLVNAPRLAELGTGSFSQELIVREYEELESALSNCKNMHTLSGLWDAKGIYLPALY
PACTHLTFLNLSYAALQSLELAKLLPHRRRLKHLWVLDTVEDKGLEAVGLNCPLLEELRV
FPADPFDDEIVHGVTDAGFVAVSFGCPRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLC
IMNPGQPDHLTNEPMDEAFGAVVKTCTKLQRLSVSGRLTDRTFEYIGRYAKNLETLSVAF
AGSSDWGMQCVLGGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRL
LAREMPRLNIEVMKEDGSDDSQADKVYVYRSIAGPRRDAPRSVLTL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaatcattcgagcttaagaggtcgaaggactcggtgaactcggaccagtcagctcac
tggtcctcatttcccgacgaagtgctggagcgagttctgtcacgtttgaaatctcacagg
gaccggagctccgcctctttggtttgcaaggactggtatcacgcggaacggtggtcgaga
accaacgttttcatcgggaactgttactccgtttcacaggagatcgtcgtgcggcggttc
tcgagaatcaggagcgtgacgttgaaggggaagcctcgattttccgatttcaacctggtg
ccggaaaactggggcgccaatatccacgcgtggctggtcgttttcgcggccaagtatccg
ttcctcgaagagcttaggctcaagcgaatggcgatcaacgaccaaagcttggagttcctc
gccgtgtcttttcctaacttcaaagctctttctcttttaagctgcgacggttttagcact
aacggactcgccgccattgccactcattgcaagaacttgactgagcttgacatacaggag
aatgacattgatgatataggaggtagttggttgagctgcttcccggagagcttcacgtcg
ttggaagttctcaactttgccaacttgactagcgatattaatttcgatgcgcttgaaaag
ctcgtcggtaggtgcaagtcgatgagggtcttaaagttgaaccggagcgtgtccttggaa
caattacagagacttcttgttaatgcccctcgattagctgagctcggtacgggttcattc
tcgcaggaacttattgtccgtgaatacgaagagctcgaaagcgcattaagcaattgcaag
aatatgcatacgctatctggtctgtgggatgccaagggcatatatctcccggccttgtac
cctgcatgcacgcatctaacgttcttgaacttgagctatgctgctttgcaaagtcttgaa
ctggctaagcttcttcctcaccgtcgacgacttaaacacctatgggtcttggacacggtc
gaagacaaaggactggaagccgttggattgaactgccctttgctcgaggaactgcgagtt
ttccctgctgatccgtttgatgatgaaattgtacatggagtcactgacgctgggtttgtg
gccgtgtcttttggttgcccaagactccattatgtcctctatttctgtcgtcaaatgaca
aatgctgctgtagcaaccattgtacagaactgccccgattttacgcatttccgattatgc
ataatgaacccaggtcaaccggatcatctcacaaatgaacctatggatgaagcttttggt
gctgtggttaaaacctgcactaaacttcagaggctttcagtttcaggtcgcttaactgat
cggacatttgagtatatcggtagatatgctaagaacttagagacgctttcagtggctttt
gccggcagcagtgactgggggatgcaatgtgttctgggtggttgtccaaaactaaggaaa
ctcgagataagagactgtccgttcggaaacgcagcactgctgtcgggtttggagaaatac
gaatctatgaggtcactttggatgtcggcctgcaatgtgacaatgaatggttgtaggcta
cttgcgagggagatgcctcggttgaatattgaggtaatgaaggaggatggaagtgatgat
agtcaagctgataaagtctatgtttatcgttcgattgcaggcccaaggagggatgccccg
cgatctgtccttactctctga
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