Hibiscus syriacus (Rose-of-Sharon): 120137337
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Entry
120137337 CDS
T09559
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
hsyr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120137337
03460 Fanconi anemia pathway
120137337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120137337
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120137337
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120137337
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120137337
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120137337
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
120137337
FA (Fanconi anemia) pathway
Downstream FA components
120137337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
120137337
NCBI-ProteinID:
XP_039009036
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MSTWQIFSHAGSDYRWEASGPVLPSKPDDDLNGAPVAPLPSMSDLLLQACSKLIENDGGV
VDKYPMFRTGLGKSVALKESSIAKALSILGEDDAASAVTPSKVIPTENGLGNSLFQTGSG
KKVNISSAGLVKAKTLFGLELDNEHDKEHPNFDGFQSSKWLPPTNEPYACQRFSHSEKKE
GLQNYGVMDFTSESRNLLNSSNGLLGGERGCENDSTPMHSKMFGSVPKPPPIKFHTAGGR
SLFVSSEALKRARSLLGDPELGDLFGKMDQEVPPFTVYKEEKFNDASSNKENCFFTSFPH
QGTMKSKDTSKEFTSPLKSSLKQMRSIFNSENLSFGSNLIEKFDAVESSSACASAGNVPS
PQNASDSINRISEKKNSTYSSGSQTKLPGKSFGGPLADISNSIDTPQTNSKQRRIGRSSF
VSPFKRPRCSKISSPLYKDASFIGNVSTSSDDHTCCKRTVSSKYPFRVQRVYVKEYFAVP
PSVCSTLKSFSVKGKQIKPENAHEYSFKDESGLTRIGAEAFYDMLHSGASMQYISKEWVV
NHYKWIVWKLACYERCYPSKCAAKFLTIHNVLEELKYRYEREVNHGHRSAIKKILEGDSS
PSSMLVLCVSKIQSSSEPKMETNLVITNGAHNSGNAKVELTDGWYSMNAVLDVLLSKKLA
AGKLFVGQKLRIWGAGMCGWVGPVSPLEASSEINLVLNMNGTFRAHWADRLGFCKVFGSP
LAFRCIKSDGGPVPLTLVGVTRIYPVLYRERLKNGGSIVRSDRMESRMAQQHNQRCSVLV
DHVISEYQRQVNSSLLLNDSESEGAKILKILETSAEPEVLMAEMSPEQLTSFATYKSKLE
ATRQLEMEKSIEKALEQAGLNDRDVVPFMRIRVVGLTNRNYHGKGRAKEGIITIWNPTEK
QESELVEGQAYAVSGLMPMNSDSEILYLQARGSTTKWQPLSPLEMESFEPFFCPRKPMKL
SNLGEISLSSEFDIAAYVVYVGEVYTASHQKKQWVFVTDDSISDPQSGLSNSLLAISFCS
PSIDDDSFAPINSNLVRSMVGFCNLIKKPKDQMNHLWVAEATENSSYHLNFNPSMSHLKS
AGASVQAWAKTSNSIINELRKKVSFVIGNCEG
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgtggcagattttctctcacgccggatcagattatcgatgggaggcttccggt
ccggtgctgccgtcgaaacccgatgatgacctgaacggagctccggttgctccactccct
tccatgtccgatctccttcttcaagcatgttcgaaacttattgaaaacgacggtggagta
gtagataaatacccgatgtttagaaccggattggggaaatctgtggcgttgaaagaatct
tcaattgcaaaagcgttatctatccttggtgaagatgacgctgcctctgctgttacacca
agtaaagtgattccaacggaaaatggcctcggtaactctcttttccaaacgggctccggg
aaaaaggttaacatatcttcagctggtctggtcaaagctaagacactgtttggactggag
ctcgataacgaacatgataaggagcatccaaattttgatggttttcaaagttcaaagtgg
ttacctccaaccaatgaaccttatgcctgccaaaggttttctcattcagagaagaaagaa
ggtttgcaaaattatggggttatggattttacatcagaatcaaggaacttattaaactct
agtaatggtttattaggaggtgaacgaggctgtgaaaatgactcaactccgatgcattcc
aaaatgtttggttcagttcccaagccacctccaatcaagtttcatactgcaggtggaagg
tcgttatttgtttcaagtgaagcattgaagcgtgcaaggagtcttcttggtgacccagag
ctaggagatttatttggtaaaatggatcaagaggttcctccatttacagtttacaaggag
gaaaaatttaatgatgcttcatcaaataaggaaaactgtttttttacttcctttccccat
caaggaacaatgaagagtaaagatacatccaaggagttcacatctccactgaaatcatct
ttaaagcaaatgagatccatattcaattcagaaaatttaagttttgggagtaatctgatt
gaaaaatttgatgcagttgaaagttctagtgcttgtgcatcagccggcaatgtgccttct
ccacaaaatgcttcagactcaatcaataggatttctgagaaaaaaaattcaacttacagt
tctggctcacagactaaattgcctggaaagtcatttggtgggccattggctgatatttca
aatagcattgatactcctcaaacaaatagcaagcagaggagaattggaagatcaagtttt
gtttctccattcaagagaccccgctgttccaaaatttcatctccattgtataaagacgct
tcctttataggaaatgtttctacttcttcagacgatcatacatgttgcaaaagaacagtt
tcttctaaatatccttttcgagtgcaaagagtatatgtaaaggaatattttgccgtgcct
ccatcagtctgcagcacgttgaagtctttctcagtcaaaggaaaacagatcaaaccagag
aatgctcatgagtattcatttaaggatgaatctggcttaactcgaatcggggcagaagcc
ttttatgacatgttacattctggagcttctatgcaatatatttctaaagagtgggttgta
aatcattataagtggattgtttggaaacttgcgtgctatgagaggtgctatccttccaaa
tgtgctgcaaaatttttgacaattcacaatgtacttgaggagttaaagtacagatatgag
agggaagtaaatcatggtcatcgttctgcaataaagaaaatacttgaaggagattcttcg
ccttcttcaatgttggtgctatgtgtttcaaaaattcaatcaagttctgaacctaagatg
gagaccaatctagtgataacaaatggagctcataatagtggtaatgcaaaagtggaacta
acagacgggtggtattccatgaatgctgttttggatgtattgctctcaaagaagcttgct
gctggaaaattgttcgtgggacagaagctgcggatctggggagcaggaatgtgtggttgg
gttgggccagtttcaccccttgaggcatccagtgaaattaatttagttttgaacatgaat
gggacgtttagagctcattgggctgatcggcttggattttgtaaagtttttggttctcct
ctggcatttaggtgtatcaagagtgatgggggtccagtccctttgactttagttggagtc
actcgaatataccctgttctctacagggagaggttgaaaaatgggggatcaattgtcaga
tctgataggatggagagtagaatggcgcaacagcacaatcaaaggtgctcagttcttgta
gatcatgttatatctgagtatcaaagacaggtcaatagttctcttctccttaatgacagt
gagagtgaaggagcgaaaatcttaaaaattcttgagacatctgccgagccagaagtcctt
atggcagaaatgagtcccgagcaacttacttcctttgctacatataaatcaaaacttgag
gctaccagacagttagagatggagaaatcaattgagaaagctctggagcaggctggctta
aatgatcgagatgttgtcccattcatgaggattagagttgttggattaactaacaggaat
tatcatggaaagggaagagctaaagaaggaataataaccatttggaatccaacagaaaag
caggaaagtgagctagttgaggggcaggcatatgccgtttctgggcttatgccaatgaac
tcagattcagaaatcctttacttacaagcccgaggatctaccaccaaatggcagcctcta
tctcccctggaaatggaaagctttgagccatttttctgcccgcggaagccgatgaaattg
tcaaatttaggtgaaatttctctttccagtgagtttgacattgcggcatatgttgtgtat
gtgggagaagtctacacagcttctcatcagaaaaaacagtgggtgtttgtgacagatgat
tccatttctgatccacagtcaggactttcaaattctttacttgctatcagcttttgctca
ccatccattgatgatgactcatttgcaccaatcaactctaacctagtacgatccatggta
ggcttctgcaaccttattaagaaaccaaaggatcaaatgaatcatctctgggtggcagaa
gcaacagaaaattcttcatatcatttaaattttaatccttcaatgtctcaccttaaaagt
gctggtgcttctgttcaggcatgggcaaagacctctaactcgattatcaacgaactccgg
aaaaaagtttcatttgttattggcaattgtgaagggtag
DBGET
integrated database retrieval system
