Hibiscus syriacus (Rose-of-Sharon): 120137656
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Entry
120137656 CDS
T09559
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120137656
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
120137656
Transfer RNA biogenesis [BR:
hsyr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
120137656
Prokaryotic type
120137656
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
IBP39
Motif
Other DBs
NCBI-GeneID:
120137656
NCBI-ProteinID:
XP_039009283
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All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MPCVSPNLRLLFSPLKPTLSFLSKPNPKPFSFSTFLASSSPAKRPRSVPRRDSLNIARRS
SSTFKERKGGGREMEMEETAGQSRDSSSFGFNKRRAEGKDKSDRPRKNPQLKERKLNPTN
TIAYVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRV
CSETAGGLPGLLLTLAGMGEEGYSVKIWGPSDLNFLVGAMKSFIPHATMVHTQSFGRAPF
SDAAENVTVPNKAVDPIVLVNDEVVKISAILLQPHCSQQSQIKPGEMSVLYICELSELMG
KFDPKKAAALGLKPGPKYSELQHGKSVKSDHLDIMVHPSDVMNPPVPGPIVFLIDCPTES
HIQDLLSIESLNGYYTEVSSNLAESRKMVNCVIHLSPASVVSSCDYQKWMKKFGSAQHIM
AGHEKRNLEFPILKSSARVASRLNYLCPQFFPAPGFLSFQHLNYSESDINSREGSTLKIC
ESIPAENLLKFTLRPYAQLGLDRSQIPIPIGHSQVINELHLEIPEIADAAQNVRGFWQGL
KESKEILTTNDKRVMIEEPWLTENTLPRCLENVRRDDLEIVLLGTGSSQPSKYRNVSSVY
VNLFSKGSLLLDCGEGTLGQLKRRYGVDGADNVIRNLKCVWISHIHADHHTGLARVLALR
RDLLKGVPHEPLLVIGPRQLKRYLDAYQRLEDLDMQFLDCRSTTEASWDTFASDDESNNN
GSSPESPMHSNAKNGTLFARGSRMQSYLRQPGSPVDHSAAYPFLRRLNNILGEAGLEALI
SFPVVHCPQAFGIVLKAAARVNSAGKVIPGWKLVYSGDTRPCQELIDACRGATVLIHEAT
FEDGLVDEAIARNHSTTKEAIEVGNSASAYRIILTHFSQRYPKIPVFDQTHMHKTCIAFD
MMSINIADLPVLPRVLPYLKLLFRNEMAADESDDIVEAVV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgccatgtgtttccccgaatttgcgcctcctcttctcccctctaaaacccactctctcc
ttcctctctaaacccaatccaaaacccttctctttctccacctttctcgcttcttcatct
cccgcgaaacgaccacgttccgtcccccgtcgtgattccctcaacattgccagaagaagt
agcagcactttcaaagaacgtaaaggcggaggcagagaaatggaaatggaggaaaccgcc
gggcagtcaagggactcttcttcttttgggtttaataaaagaagggctgaagggaaagat
aagagcgataggcctagaaagaatccccagttgaaagaacgcaagcttaatcctactaat
actattgcatatgttcagattttggggactggaatggatacacaagacacatcaccttca
gtcttgctcttctttgacaaacagagatttatttttaatgccggagagggattacaacgg
ttttgcacagagcataaaattaagttatcgaagatagatcacatatttctctcacgtgtc
tgctcagaaacagcgggtggacttccaggtttgctgttgactttggctggcatgggagaa
gaagggtatagcgtcaaaatctggggaccctcggatctcaattttttagtaggggcaatg
aaatctttcattccacatgcaactatggttcacacacagagctttggacgggcaccattt
tctgatgctgctgaaaatgtaactgtaccaaataaagctgtagatcccattgttcttgtc
aatgatgaggttgtcaagatatcagcaattctcctacagcctcattgctcacaacaatcc
caaataaagcctggtgaaatgtctgtgttatatatttgtgaattgtctgagcttatgggg
aaatttgacccaaaaaaggctgcagcacttggcctaaaacctggaccaaaatatagtgag
ctacaacatggtaaatcagtgaagtcagaccacctagatataatggttcatccatctgat
gtaatgaatcctcctgtccctggtcctattgtcttcctgattgactgtcctacagaatct
catatacaggacttgttatccatagaaagcctcaatggatactatactgaagtatcaagt
aatctagcagagagtaggaagatggtaaactgtgtcattcatttaagtcctgcttctgtt
gtaagcagttgtgactaccagaaatggatgaagaaatttggttcagcacaacatatcatg
gctgggcatgaaaaaaggaatcttgagtttccaattctaaaatcaagtgcaagagttgca
tcacgtcttaattacttatgcccacagttctttccggctccaggattcttgtcctttcag
caccttaattactcagaatcagatattaactcacgtgagggttccactttgaagatctgt
gaaagcattcctgctgaaaatctcttaaagttcacgttgcgcccttatgctcaactggga
ctggacagatcacaaattccaattccgataggccactctcaagtaattaatgaactgcat
ttagaaattccagagattgcagatgctgcacaaaatgtcagagggttttggcagggacta
aaagaaagtaaggagatattaactacaaatgataaaagagttatgattgaagaaccatgg
ttgactgaaaatactctgcctagatgtttggaaaatgtaaggagagatgacctggaaatt
gtgcttcttggtacgggttcgtcgcagccttctaagtatcgcaatgttagctctgtctat
gtcaatcttttctccaagggaagtttgctcttggattgtggagaaggaaccctgggacaa
ctgaaaagaagatatggcgtagatggtgcagacaatgttattagaaatctaaaatgtgtt
tggatatctcatattcatgctgatcaccacacgggtctggcgagggttcttgctttgagg
cgtgatttattgaagggagtgcctcatgaaccattactggttataggaccacgacagctt
aaacgatatttagatgcatatcaaagacttgaagatcttgatatgcagttccttgattgt
aggagtaccacagaagcttcatgggatacttttgccagtgatgacgaatcaaataataat
ggatcatctccagaaagtccaatgcattcaaatgccaaaaatggaactttgtttgctaga
ggtagccgcatgcagagctatttgaggcaaccaggcagtccagtggaccattctgcagct
tatccattcctaaggagattgaataatatactaggcgaagcaggattagaagctttgatt
agttttcctgtcgtgcactgtccccaggcatttggcattgttttgaaagctgcggcgcgt
gtcaacagtgctggaaaagtcatcccaggatggaagcttgtgtactcgggtgacactagg
ccctgtcaagaactgattgatgcatgtcgtggagcaacagttctcatacacgaggcgact
tttgaggatggtttggttgatgaggccattgcaagaaaccacagtacaaccaaggaagcc
attgaggtgggaaactctgcgagtgcttatcgcattatcctaacccatttcagccaaaga
tacccgaaaatccctgtattcgatcagacacacatgcataagacatgcattgcatttgac
atgatgagtattaacatagcagatttgccggtgcttcccagagtcctcccataccttaaa
ctgctttttagaaatgagatggcagcagatgagtcagatgatattgtagaagctgtggtg
taa
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