Hibiscus syriacus (Rose-of-Sharon): 120138519
Help
Entry
120138519 CDS
T09559
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120138519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120138519
03009 Ribosome biogenesis [BR:
hsyr03009
]
120138519
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120138519
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 related factors
120138519
Complex B
120138519
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Helicases
120138519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
120138519
NCBI-ProteinID:
XP_039009897
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MAAAATATASGGPQYAPPDPTLPKPWKGLVDGKTGYLYFWNPVTNVTQYERPTNIDSGPK
SSSVPMGSSVLVQQSYEGRYRYSSEKEHDRYGKVSDAVPKLESVLGSDQNARGGPFHSHT
PNGTSNTLIGGLFARGLGSAAGESNLSGDAYCHQHEITVTGGEVPPPFSSFESTGFPSEI
LREVHNAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLLPGFMHLKRCRNDPQM
GPTVLVLSPTRELATQIQEEANKFGKSSRIRCTCLYGGAPKGPQLREIERGVDIVVATPG
RLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTRRQTLMYTATWPKEV
RKIAADLLVNPVQVNIGNIDELVANKSITQFVEVLSPMEKHRRLEQILRSQEPGSKIIVF
CSTKKMCDQLARNLARQFGASAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARGLDVK
DIRVVINYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDSKHTSELIKVLEGANQRVP
AELRDMASRGGGRGMPRRWTPNSGGRGRTGFGFGGRDGGRGGRGISSLPSSWNERTGGQG
YRHESSDSYNKGRSRSRSPAGWGDCSKSGFHERSRSRSADRYDSAAARQRS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgcaactgcaactgcatctggtggtccacaatatgctccgccagaccca
actcttcccaaaccatggaaaggcctagttgatggtaaaactggttatctctacttttgg
aatccagttacaaatgtcacacaatacgaaaggcctacaaatatagattctggcccaaaa
tcttcttcagtgcctatgggttcttcagtgctggttcaacaatcttatgaaggacgttat
aggtatagttctgagaaggagcatgatcggtatggaaaagtatccgatgctgtaccaaaa
cttgagtcagtattagggagtgatcagaatgctaggggtggaccatttcattcccataca
cctaatgggacttccaacactcttattggtggattatttgctagaggactgggatcagca
gctggagaaagtaatttgtctggtgacgcttattgtcatcagcatgagataacagtaact
ggaggtgaagtaccaccgcccttttcatcatttgaatctactggttttccttctgagata
ctgagagaggtgcacaatgctgggttttctgctccgactcccattcaggctcagtcatgg
ccaattgcattgcaaggtagagacatagtggccattgcgaaaacgggttctgggaaaaca
ttgggttatctacttcctggatttatgcatctcaaacgttgccgtaatgatcctcaaatg
ggtccaactgtgttagttttatcgccaactagggagttggctactcaaatacaagaggaa
gctaacaagtttgggaagtcgtcaagaattaggtgcacgtgtttatatgggggagcacca
aagggtcctcagttgagagagattgagagaggagtagatattgtggttgccactcctggc
aggttaaatgatattctggagatgaggagaatcagcctccaccaagtttcttacctcgtg
ttagatgaggctgatcgcatgttggacatgggctttgaacctcaaatacggaagattgtg
aatgaagttcctactcgcaggcagacactaatgtacacggcaacatggccaaaggaagtc
cgtaaaattgctgctgatctactggtaaatcctgttcaggtcaacattggcaatattgat
gagcttgtggcaaacaagtctattacccagtttgttgaagtattatcaccaatggaaaag
cacagaagattggagcagatactgcgctcacaagaaccaggatccaagataattgttttt
tgttcaactaagaagatgtgtgatcaacttgctcgcaacctcgctcgacaatttggagct
tctgctatccatggagacaaatctcaggctgacagagattatgtgttaagtcagtttcgc
actgggaggtccccagtgcttgttgctactgatgttgctgctcgtggattggatgttaaa
gacataagggtggtaatcaactatgactttcctactggggtcgaggattatgttcatagg
attgggaggactggaagggcaggtgctactggattagcatatacattctttggtgatcag
gattcgaagcatacttcagagctaatcaaagttctagaaggtgcaaaccagagggtgcct
gcagaacttcgtgatatggcttcacgtggtggtggaaggggaatgcctagacgttggact
cccaattctggtggccgtggtcgtactgggtttgggtttggcggcagggatggtggcaga
ggtggtcgaggaatttcttcattaccatctagctggaatgagagaactggaggacaggga
tataggcacgagtccagtgatagttacaataagggaagaagtcgcagtcggagtcctgca
ggttggggtgattgcagtaaaagtggtttccatgaacgcagccggagtcgtagtgctgac
aggtatgatagtgctgctgcacgtcaacgctcgtga
DBGET
integrated database retrieval system