KEGG   Hibiscus syriacus (Rose-of-Sharon): 120138864
Entry
120138864         CDS       T09559                                 
Name
(RefSeq) TATA-box-binding protein isoform X1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120138864
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsyr03000]
    120138864
   03021 Transcription machinery [BR:hsyr03021]
    120138864
Transcription factors [BR:hsyr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    120138864
Transcription machinery [BR:hsyr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     120138864
  RNA polymerase III system
    TFIIIB
     120138864
  RNA polymerase I system
    SL1/TIF-1B
     120138864
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 120138864
NCBI-ProteinID: XP_039010191
LinkDB
Position
Unknown
AA seq 201 aa
MAEQVGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKQIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIV
GSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRD
ETYTAFENIYPVLTEFRKNQQ
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcggaacaagttggcttggaagggagccaaccagtggatctttctaagcatccatct
ggcattgttcccactcttcagaacattgtatcaactgtaaacttagattgcaagttggat
cttaagcagattgcactgcaagctcgaaacgcagagtacaatccgaagcgttttgctgca
gtcattatgagaatcagggagccaaaaactacagcgttgatttttgcctctggaaagatg
gtctgcactggcgcaaaaagcgaacagcagtctaaactggctgcgaggaagtatgccaga
attatccaaaagcttggttttcctgctaagtttaaggacttcaagattcagaacattgtt
ggttcttgtgatgttaaatttcctatcagacttgaaggtcttgcatactcccatggtgcc
ttttcaagttatgaaccagaactctttccgggcctgatctatcgtatgaaacaaccaaag
attgtgcttcttatttttgtgtcggggaaaattgtgatcaccggagctaaggtgagagat
gagacatacacagccttcgagaacatatatcctgtccttacagagttcaggaaaaaccaa
caataa

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