Hibiscus syriacus (Rose-of-Sharon): 120139317 Help Entry 120139317         CDS       T09559                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism hsyr  Hibiscus syriacus (Rose-of-Sharon) Pathway hsyr04142   Lysosome biogenesis hsyr04145   Phagocytosis hsyr04148   Efferocytosis Brite KEGG Orthology (KO) [BR:hsyr00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     120139317    04142 Lysosome biogenesis     120139317    04148 Efferocytosis     120139317  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsyr04131]     120139317 Membrane trafficking [BR:hsyr04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     120139317 SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin TPR_WDR35 zf-HC5HC2H zf-HC5HC2H_2 AlaDh_PNT_N Motif Other DBs NCBI-GeneID:  120139317 NCBI-ProteinID:  XP_039010513 LinkDB All DBs Position Unknown AA seq 1005 aa AA seqDB search MTGIKRSKNMVHSAYDSFQLLTGCPNKIDAIESYGSKLLLGCSDGSLRIYGSDPSADRSP PSDPHALRKEPYSLERTVSGLSKKALISMQVLESRELLLSLSESIAFHRLPNLETIAVIT KAKGANVYSWDDRRGFLCFGRQKRVCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICL GIRKEYVILNATNGALWEVFSSGKIAPPLVVALPSGELILGKENIGVFVDQNGKLLQADR ICWSEAPTSVVIQKPYAIALFPRRVEIRSLRVPYQLIQTIALPGVRRLIKSNNAIVVALE NSVHGLFPVPLGAQIVQLTASGNFEEALALCKLLPPEDASLRAAKEGSIHMRYAHYLFDN GSYEEAMEHFVASQVDITYVLSLYPSIILPKATAVSEPEKLVGHSLDAPHLSRGSSGLSD DLETFLPPSESDDNSALEFKKMSHNTLMALIKFLQKKRYSIVEKAAAEGTEEVVLDAVED SFTSSRLKKSSKGRVNVPINSAAREMAAILDTALLQALLLTGQSAAAVELLKGLNYCDAK ICEEILQKGNHYAALLELYRSSSMHREALTLLQQLAEESKSNHSQAELIQEFSPEAIIEY LKPLCGTDPMLVLEFSMLVLESSPTQTIELFLSGNIPADLVNSYLKQHAPNMQGRYLELM LAMNENGISGNLQNEMVQIYLSEVLEWYSELSAQQIWDEKEYSPTRKKLVSALESISGYN PEALLKRLPPDALFEERATLLGKMNQHELALSLYVHKLHVPELALAYCDRVYESAVHHPP TKSSGNIYLTLLQIYLNPQKTTKNFEKRITNLVSSSNASIPKISSTASFKTRGARKKIAS IEGAEDMRISPTNTDSSRSDGDAEESSEEGGSSIMLDQVLDLLSRRWDRLNGAQALRLLP RETKLQNLLPFLGPFVKKSSEAYRNFSVIKSLRQSENLQVKDELYNQRKAVVKISSDSMC SLCNKKLGTSVFAVYPNGTTLAHFVCFRDSQSMKAVSKVSQLRKR NT seq 3018 nt NT seq  +upstreamnt  +downstreamnt atgaccggaattaaacgatccaagaacatggtgcacagcgcctatgattccttccagctc ctcaccggctgtcctaataaaatcgacgccatcgaatcctacggctcgaagctgcttctc ggttgctccgatggttcccttcgaatatacggttcggatccctctgctgatcgatctcct ccgtccgatccccacgccttgcggaaggaaccttactcgctggagagaaccgtttctggg ttgtcgaagaaggctctgatttcaatgcaagtactggaatcgagagagctactgttatca ctctctgaatcgatcgcttttcatcgcctccccaatttggaaaccattgctgtgatcacc aaagctaaaggcgctaatgtctactcttgggacgatcgtagaggtttcctttgctttggt aggcaaaagagggtctgtatcttcaggcacgacggagggcgagggtttgtggaggtaaaa gattttggtgtaccagatacagtgaagtctatgtcatggtgtggcgagaacatatgtcta ggaattagaaaggaatacgtgatactaaatgccacaaatggtgcattgtgggaggtgttt tcttctgggaagatagcaccacctttggtcgttgctcttccctctggggaacttattctt gggaaggaaaatatcggtgtctttgtggatcaaaatggaaagcttcttcaagctgatagg atatgttggtcagaagctcctacttctgttgtcatccagaaaccatatgcaatagctcta tttccaaggcgtgttgagattcgctctcttagagttccttatcaattgatacagactatt gcgctccctggtgttcgccgtcttataaaaagtaacaatgccattgttgtagccttagaa aattctgttcatggactcttccctgttcctctcggtgcacagattgtccaattaacagca tccggaaattttgaggaagcattggctttgtgtaagttgcttccaccagaagatgcaagt cttagagctgcaaaggagggatcaattcatatgaggtacgctcattatctttttgacaat gggtcctatgaggaagcaatggagcactttgtggcatctcaagtagatattacgtatgtt ctttctttgtatccatccattattcttcccaaagcaactgcagtgtcagagccagagaag ctggtgggccattctctggatgctccacacctttcaagaggctcatctggactgtctgat gatctggaaacctttctcccaccatcagagtctgatgataattccgcactcgagttcaag aaaatgagccacaatactctcatggctcttattaagttcctacagaagaagagatacagt attgtagagaaagctgccgctgagggaactgaagaggtagttttagatgctgttgaggat agttttacttcgtccaggcttaagaaatcaagtaaggggcgtgttaatgttccaattaac tcagctgccagggagatggcagctatactggatacagccctcctccaagctctgcttctt actggacaatcagcagcagctgttgaattgcttaaaggtcttaattattgtgatgcaaaa atatgtgaggagattcttcaaaaaggaaatcattatgctgctcttttagaactttataga agcagttcgatgcatcgggaggcattaacacttctacagcaattagcagaagaatcaaaa tcaaaccattcgcaagctgaactcatccaagagttcagtcctgaggcaattattgaatat ctcaagcccctctgtggcactgatcccatgcttgtacttgagttctcgatgcttgttctc gaaagctctccaacacaaaccattgagctttttttgtctggaaatattccagcagacttg gtcaactcttatttgaagcagcatgctccaaacatgcagggcaggtacttggagctcatg cttgcaatgaatgaaaatgggatctcagggaacctgcaaaatgaaatggtacaaatctat ctttctgaagtacttgaatggtattcagaactaagtgctcaacagatatgggatgaaaag gaatattctccaacaaggaagaaacttgtatctgcgctggaaagcatctcaggatacaat cctgaggctttgttgaaacgtcttcctccagatgctctatttgaagagcgtgcgactctg ttagggaaaatgaaccaacatgagcttgctttatcactatatgttcataagcttcatgta cctgaactggcactggcctattgtgatcgggtctacgagtcagctgttcatcacccaccg acaaaatcttctggcaatatatacctcactctgttacagatatatctgaatcctcaaaaa acaaccaagaactttgaaaagagaattacaaatttagtatcatcctcaaatgcaagcatc ccaaagattagttcaacagcttcatttaaaactagaggagcacgaaagaaaattgcatcc attgaaggtgcagaggatatgcgtattagtcccaccaatactgatagtagcaggagtgac ggtgatgctgaagaatctagtgaggaaggaggttcttctatcatgcttgatcaggtgctt gatcttttgagccgaaggtgggatagactcaatggagctcaggcactcagactcttaccg agggagactaaactacagaacttgcttccatttcttggaccttttgtgaaaaaatccagt gaagcatacaggaacttctctgttatcaagagcttgaggcagagtgagaacctacaggtg aaagatgaactttacaaccaaagaaaagccgtagtgaagatctcgagtgacagtatgtgc tctctgtgcaacaagaaactaggaacaagtgtatttgccgtctatccaaatgggacaaca ctggcccactttgtttgctttagagattcacaaagtatgaaagcagtatccaaagtctca caactaaggaagagatga

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