Hibiscus syriacus (Rose-of-Sharon): 120139811
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Entry
120139811 CDS
T09559
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120139811
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120139811
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
120139811
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
120139811
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_EF3_N
HEAT_GCN1_C
HEAT_GCN1
TPR_DNAAF5
Cnd1
Tudor_KDM3B
BRCA2
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
120139811
NCBI-ProteinID:
XP_039010870
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MDESTLKLISGIGTKLTQLSRPNKDVLIKSLRQAVSALSQIEQPSVNEASAKALVLGKLK
AATEPLRNSIVKHGLFNHTDKDVRLLVASCVGEFFRILAPQPPFADKYLRDVFKLILSVF
MELADSTNAFFSRRVKILETVARCKCCVIMLDIDCNDLILEMFNIFFSVVRDHHQQSLIN
NILSIMSDILNEEVSPQLMDVILGNLIQECKDTTSAASQLAASIIQSCAEKLQPYICGFL
TSCSLDRDSVGSELKESYHEIVLKIFQCAPEMLNAIIPSMTQELMTDQVDARIKAVNLIG
KLILCPEYRVAQRYHVLFVEFLKRFADKSSEVRVAALQCAKACCLANPSGIESLELHTSV
KDRLLDFDDKVRMQAVIVACDIVRSNLKYTSPEFISEFTERLRDKKISVRKKALQKVMEL
YRDYCDKCAEGHITICDHFEQIPCKVLMLCYNKDCKEFRSQNIELVIAEELFPTLLPVEE
KTRHWIHLFSLFSPSHVKALTAILSQKRRVQTEMRNFLALRRKEKEISSEDMQKLRSSFV
KMSASFPDPSKAEECFDKLNQMKDNKIFSSLNLLLDDATLESALEKRDKFLKVIGNKHPH
FEFLQLLSSKCLFNIFDSEHVRCILNLVSSSGLESNHLEAFSIELLLVIISNFPSLIRGS
ELQFPLLFKEKYLIHDKIILVLAKAGPYISVKFSDFDSVLKKICLEGTRTQSKYAVSAIA
SLIDVSEQYVFSELCKGLVDSLHRGQSTATVLQSLGCIAQYSVSAFEDHDREITEYVYEK
IFQAKSLDNPSVIEDSSGCTTCKLKIYGLKMLVKSFLPHRGCHINRQIKSLLDILLKMLQ
KEDVVDDIISCVDDRDYIRLAAAKSVLQLSRRWDLHISPDIFRFTILMGKDSSSSVRISF
LDKLHKLLKERVIPIRYACAFMLATADGFKDLQHSFKYMEFIKEYGREARIHQTSIVQEG
SIMVYPAYLVVFLIHVLAHDEDFPPEGCQDEALYAQFCSPLLLFLHTLINSNNIDEDMNL
INDAAFNLYYIFQAIKRAKDADDALRTPRLHFLANVGISGVNSFYQKGISSLPRPGKILL
PSSLYKINHMENEEANLSFLTQTFVARVIHIFKSQISLPVGSVHKRGRKCHENDIFNMLS
HKREDFSTRGALVHKKPTRQDISLGHRRIRAVSPNALGSVRSHNKEQECGASNSSESALE
KGKPFSSSNSFTQKASQMEPEVPTQKVEGCSASEGNVGADKSNTAEASNSHKEMGTGNKA
LVGQRIKVWSTYDNCFYTGTVDDFNPVNNTHKIMCDSGEVDILCLDSESWETISDCSLTD
REIQPSDKPNALHLRQCVKETAVKLINDSRQQSKTKLNMEDSKVHCREKRKKEERSSRNS
SVSEVINIDEDRVARTRRRKA
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcaacattgaaactcatctccggaatcggcaccaaactcacccaactctct
cgccctaacaaagatgtcctcatcaaatctcttcgtcaagctgtgagtgcattgtcacaa
atagagcagccttcagtgaatgaagcttccgcaaaggcgctagtgttgggaaaattaaaa
gcagccacggagcctttgaggaattctattgttaagcacggtctatttaaccataccgat
aaagatgttagacttttggtggccagttgtgttggtgaattttttcggatcctggcacct
caaccaccttttgcagataaatatctcagggacgtttttaaactcattctcagcgtgttc
atggagcttgctgattctacaaatgcattcttctcgaggagggttaaaatattggagact
gttgctcgatgcaaatgttgtgtgataatgctggatattgattgcaatgatttgatcctt
gaaatgtttaatatttttttctcagttgtgagagatcaccatcaacagagtttaatcaat
aatattctgtctataatgagtgacattctaaacgaggaagtatccccccagcttatggat
gtaattttgggaaatctcatacaggaatgtaaggatacaacttctgcagcttctcagctt
gctgcctctattatccaaagttgtgcagaaaagcttcagccctacatttgtggattttta
acatcttgctccttggatagagattctgtaggtagtgagctcaaagaatcgtatcatgaa
attgtgttaaaaatctttcagtgtgctcctgagatgctaaatgctatcatccccagtatg
acccaagaattaatgactgatcaggttgatgcaagaataaaggctgttaatttaattgga
aaacttattttatgtcccgaataccgtgttgcacaaagatatcatgttctttttgtagag
tttttgaaaagatttgctgataaatcttcagaagttagagttgctgctctacaatgtgct
aaagcttgttgcttggccaatccctcagggatagaatctcttgaacttcacacttctgtt
aaagatcgactgctggattttgatgataaagtgagaatgcaggcagtgattgttgcctgt
gatattgttaggtctaaccttaaatatacttcacctgaattcatatctgagtttacagag
agacttagggataagaagatttccgttagaaagaaagccttgcagaaagtgatggaacta
tatcgagattattgtgacaagtgtgcagaagggcatattacaatatgtgatcattttgag
cagattccttgcaaagtcttgatgctttgctacaataaagattgcaaagaatttaggtcc
caaaacatcgaacttgttattgcggaggagttatttcctactcttcttccagttgaagag
aagacaagacactggatccatttgttttctcttttcagcccttctcatgtgaaggctctc
actgctattttatctcagaaaagaagggtgcaaactgaaatgcggaattttttggcctta
cgaaggaaagagaaggagattagttcagaggatatgcagaagttgagaagttctttcgta
aaaatgtcggcttcatttcctgatccatccaaagctgaagagtgctttgacaagttgaat
caaatgaaggacaacaaaattttctcttcactcaatctgttgttggatgatgcgacactt
gaaagtgccctggagaaaagagataaattccttaaggtgattgggaataaacatccacac
tttgagtttttgcagttgctctcctcaaagtgcttgtttaatatatttgactcggagcat
gtccgttgcattctcaatcttgtttccagtagtgggttggaaagcaatcatttggaagcc
ttttcaatagaactacttttggttatcatcagcaatttcccatcactcattaggggttca
gaacttcagttccccctgttgtttaaagagaagtatctgattcatgataagatcattcta
gttttagcgaaagcagggccttatatctctgttaaattcagtgactttgactctgttttg
aaaaagatctgtcttgagggaactcgcactcagtcgaaatatgctgtttctgctattgct
tcacttatagatgtatctgagcaatatgttttctcagagttatgtaagggacttgtggat
tctttacatcgtgggcagagtactgcaacggttttgcagtcattgggctgtattgcccaa
tattctgtttcagcttttgaagatcatgatagagaaatcacagaatatgtgtatgaaaag
atttttcaggcaaaatcattggataatccttcagtcattgaggatagctctgggtgtact
acttgcaaactaaagatttatgggcttaagatgcttgtcaagagttttttgccccatcga
gggtgtcatatcaatagacaaattaagtcattgttggacattttgttgaagatgcttcag
aaggaggatgtggttgatgatatcatctcatgtgtagatgacagggattatataagactg
gctgctgcaaaatctgttctccagctttctagaagatgggacctacatatttctccagat
atttttcgcttcacaattttgatgggaaaggattcttcttcttctgtcaggatatcattt
cttgataaattacacaagctgttgaaggaacgagttatacctataagatatgcttgtgct
tttatgctggctaccgctgatggcttcaaggatctacagcattcattcaaatatatggag
tttatcaaggaatatggtagagaagctcgaatacaccaaacatctattgtgcaggaaggg
tcaattatggtctacccagcatacttggtggtattcttgatccatgtgcttgcgcatgat
gaagacttcccacctgaaggttgtcaggatgaagcattatatgctcaattttgcagtcca
cttcttttgttcttacacacattaatcaactctaataacattgatgaagatatgaatctt
atcaacgatgctgctttcaatttgtattatatatttcaagctattaaaagagcgaaggat
gctgatgatgctctgagaactcctaggctgcactttctagccaatgttggaatttctggt
gtaaattcattttatcagaaaggcatctcctctttacccagaccaggaaagatcttgctt
ccatcatcattgtataaaataaatcatatggaaaatgaagaggctaatttgagttttctt
actcaaacttttgttgcgagggtcattcacattttcaagtctcaaatctctctgccagtt
ggatctgttcataaacgtggtcggaagtgtcacgagaatgatatttttaacatgctatca
cataagcgtgaagatttttcaactcgtggggcacttgtgcataaaaaacctacaaggcag
gatatcagtctgggacataggcgaatacgtgctgtttctccaaatgcattgggatctgtt
agatcacacaataaggagcaggaatgtggtgcatctaacagttctgagtcagctttagaa
aaagggaagcccttttcttcttccaattctttcactcagaaagcttctcagatggaacca
gaagttccaactcagaaagttgaaggatgtagtgcctcggagggaaatgttggtgcagat
aaaagcaacactgctgaagcctccaatagtcacaaggaaatgggtaccggaaataaggca
ttagttggacagcggatcaaagtatggtctacctatgataactgtttctatacgggcacc
gttgatgactttaatccagtaaacaacacacacaagatcatgtgtgatagtggggaagtt
gatatattatgcttggacagtgagagctgggagacgataagtgactgttccttgacggat
agggagattcaaccatcagataagccaaacgccttgcatttgcggcaatgtgtcaaagag
acagctgttaagctgataaatgattccaggcaacagtcaaagacaaagttaaatatggag
gacagtaaggttcattgcagagaaaagagaaagaaggaagagagatcatccagaaattca
tcagtatcagaagttatcaatatagacgaagatcgtgttgcaagaactcggagacgaaaa
gcgtaa
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