Hibiscus syriacus (Rose-of-Sharon): 120140105
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Entry
120140105 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120140105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120140105
Spliceosome [BR:
hsyr03041
]
Complex A
Other components
Complex A specific factors
120140105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
PHD_4
RRM_5
zf-CCHC
Med19
KH_PNO1_2nd
RRM_MUD2_C
DUF8363
RRM_7
Salivary_glue
Motif
Other DBs
NCBI-GeneID:
120140105
NCBI-ProteinID:
XP_039011074
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MDSIHANLNDPQTYSAQTLNSCDQHPHPPPATPSEALSSDHSKTLGSAPDDGYDKKKXSQ
VNYEAGSGTINNVSSSKPEIHKPLLSENGLTNTQSGTTDKDCSGGEEETTSRRRRRSRWD
PPSDSNEKQSGNGETGSGNKKRKSRWADDEPKPVIQLPDFMKDFTGGIQFDPEIQALNSR
LLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERLNRERQEIISQIL
KKNPAFKPPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRG
KGSVKEGRFQQKRDMKPDPSENEDLHVLVEAETQESLDAAAAMLEKLLHPVDEVLNEHKR
QQLRELASLNGTIRDEEYCRLCGEAGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPM
KGTTGKKMDDEYQNFLAELGGTVPDSASKENSSSVSSGSNPPWASNSGNAHPGLGFNAVK
PPKDYDDTNLYIGYLPPNLDDDGLISLFSSYGDIVMAKVIKDRVTGLSKGYGFVKYANVD
MANNAIKSMNGYRLEGRTIAVRVAGKPPQPAVPPGPPTQSVATGLVSSQPVGAYPSQQFA
TGGPLNNIAPANYAANSVPWGPPVPPPYAPYAPPPPPPGSTMYPPVAGQPMPPYGLQYPP
HVQTFPPGVPPPPVTCSEMPQNFPPGVQPEISTSAPAVSTNIYGNSMTAILPSSQTAYST
SSLGYSSYYSAVPPPLPPAPTSLADHSQSIGNVPWAPNPPFPPAVSSAENATYGADAEYE
KFLAEMK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggattctatccacgccaacctaaacgatccccaaacctattctgctcaaaccctcaat
tcatgcgaccagcatcctcatccgccgccggcgacgccttcggaggcattatcatcagat
cattccaaaaccctaggatctgctcctgacgatggatatgacaaaaaaaagnntagccag
gttaattacgaagccggatccggcactatcaacaatgtttcttcatcgaaacctgagatt
cataagcccctgctatcggaaaatgggttaactaacacgcagagcggcaccaccgataag
gattgttctggcggagaagaggaaaccactagccgaaggcggaggaggagccgttgggac
cctccttcggattcgaacgaaaaacagagcgggaatggtgagacaggcagtgggaacaag
aagaggaagtcccgatgggcagatgatgagcctaagccggtgattcagcttcctgatttc
atgaaagatttcactggaggtatccaatttgaccctgagatccaggctttgaatagtagg
ttgctagagattagtagaatgttgcagtctggattacctttggatgataggcctgagggt
gctaggtcaccttctcctgaacctatatatgataatatggggattaggattaataccaga
gaatatagggctagagagagattgaacagagagaggcaggaaattatatctcagattctt
aagaagaatccagcattcaagccgccggcagactataggccacctaagcttcacaagaag
ctttatataccgatgaaagaatacccaggttacaattttatcgggttgattatcggacca
agagggaatactcaaaagaggatggagaaggaaacaggtgcgaagattgtaattcggggt
aaaggttctgtaaaggaaggtaggtttcagcagaagagggatatgaaacctgatccttct
gagaacgaggacttgcatgttttagttgaggctgaaacccaagaatcacttgatgctgct
gcagcaatgttggaaaagctcttgcatcctgttgatgaagttttgaacgagcataagagg
caacagttgagggaattagcttctttgaatggaacgataagagatgaagagtattgtaga
ttgtgcggtgaggcgggtcatcgtcagtatgcatgtccttcacgcacttctacttttaag
agtgatgttttatgtaagatttgtggagatggcgggcatccaacaattgattgtccaatg
aaaggaacaacagggaagaaaatggatgatgaataccagaatttcttggccgagttagga
ggtactgttcctgattctgctagcaaggaaaactcttcatctgttagttctggaagcaat
cctccttgggctagcaacagtggaaatgcacaccccggtttagggttcaatgctgttaag
cctcctaaggactatgatgatactaatttgtacattggatacttacctcccaatcttgat
gacgatggtttgatcagtttgttctcatcttatggtgatattgtgatggcaaaggtaatt
aaggaccgggttactggactgagtaagggctatggttttgtgaagtatgccaatgttgac
atggcaaacaatgccattaagagtatgaatggttatcgtctagaaggaagaaccattgct
gtgagagttgctggcaagccacctcaacctgctgtgcctcctggtcctcctacacaatca
gtggccactggccttgtttctagtcagccagttggtgcctatccatcacagcaatttgca
actggaggtccgcttaataatattgctcctgctaattatgccgcaaattcggttccatgg
ggaccaccagttcctcccccctatgcaccttatgctcctcctccgcctcctcctggatca
accatgtatcctcctgttgcaggtcagcctatgccaccttatggcttgcaatatccccca
catgtacagacttttcccccaggtgtcccacctccacctgtgacttgtagtgaaatgcca
caaaatttcccacctggagtgcaacctgaaatcagtacctctgcccctgctgtttctaca
aatatatatggaaactcaatgactgcaatactgcctagttcacaaacagcatactcaaca
tcttccttaggttactcttcttattacagtgcagttcctcccccccttcctccagcacct
acatctttggcagaccattcccagagcattggtaatgtgccttgggcaccaaaccctcct
tttcctccagcagtctcatctgctgagaatgcaacctatggtgcagatgctgagtatgag
aagttcttggcggagatgaagtga
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integrated database retrieval system
