Hibiscus syriacus (Rose-of-Sharon): 120140376
Help
Entry
120140376 CDS
T09559
Name
(RefSeq) protein SMG9-like isoform X1
KO
K18735
protein SMG9
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120140376
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
120140376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
RsgA_GTPase
AAA_18
nSTAND3
MeaB
AAA_16
AAA_29
DO-GTPase2
AAA_17
Motif
Other DBs
NCBI-GeneID:
120140376
NCBI-ProteinID:
XP_039011295
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MAGSTSGTNPSLNPSAPKILLAKPSVGPVSGKFGRGAGEDETVPHRARLPPVGSLNLLSD
SWEFHIDRFLPFLTENTDFKVVGIIGPPGVGKSTIMNELYGFDGISPGMLPPFAIQSEET
RAMARHCTVGIEPRISAERLILLDTQSVFSPSVLSEIMRPDGSSTVSVLSGESLSAELAH
EIMNIQLGVLLASICHILLVVSDGVHDNRMWHMMLTVDLLKHGIPDPSSLVPLHSQSSTS
GPDKESKDKVHETEEYIGTPVFVHTRLQNQDLSPSNILQMKKALLQYFSSSSFMRRTCGK
KPADQLAMSQINGKDKELLNLFVIPCKNNDDSTRAQCESYVYSLWKLRDQVSFYASFFLP
ATIRLGPSFLSPSFKGFCNILAFRKSFLYIYVYQTYNKCSSQVLSMSCPSFTRNVSERDW
LKSSAKIWELVKSSPIIGEYSRTLLSSGIFRR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttccactagcggtaccaacccctcattaaacccttctgctcccaaaatccta
ttagccaagccatcagttgggccggtttctggtaaatttggacgcggagccggtgaagat
gaaacggtgccgcatagggctcgtctccctcccgttggttccctcaaccttctttctgat
tcctgggagtttcacattgatcgatttttgccttttttgactgagaataccgattttaag
gtggttggaatcattggtccaccaggcgtaggcaagtcaacaatcatgaatgagctttat
ggttttgatggaatctcacctgggatgctgccaccttttgccatacagtcagaagaaacc
agagcaatggcaaggcattgtactgtaggtattgaaccaaggatttctgctgaacggctt
atactactcgatacccagtctgttttcagtccatcggttttgtctgagattatgagacct
gatggctcatccacagtttcagtactaagtggtgagtcactgtctgctgagttggcacat
gaaattatgaatatccagcttggtgttcttctagcatccatttgtcatattttgcttgtg
gtgtccgatggagttcatgataacagaatgtggcacatgatgctgacggttgacttattg
aaacatggcattcccgatccatcttctttagttcctctccattcacagagctctacatca
gggcctgacaaagagagcaaagataaagttcatgagactgaagagtatatcggtactcct
gtttttgtgcatacaaggctacaaaatcaagacctttctccgtctaatattcttcaaatg
aagaaggcacttttacaatatttcagttcctcttcatttatgagacgcacatgtgggaaa
aagcccgctgatcaactggccatgagtcagattaatggtaaagataaagagttgctcaat
ttatttgtgatcccttgtaagaacaacgatgactctaccagagctcagtgtgaaagctat
gtctactcgctatggaagttacgtgatcaggtctctttctatgcatctttttttcttcct
gcaactatccgccttggtccttcttttctttctccctcatttaagggattctgtaatatt
ctagcttttcgtaagtcatttctttatatatatgtatatcagacttataacaagtgttct
tcacaggttttgtcaatgagctgcccttcgtttacaaggaacgtttctgaacgtgactgg
ttaaaaagttctgccaagatatgggaattggtgaagagctctcctatcattggtgagtat
agcagaacattattaagttcaggtatatttcgcagatga
DBGET
integrated database retrieval system
