Hibiscus syriacus (Rose-of-Sharon): 120141248
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Entry
120141248 CDS
T09559
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120141248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120141248
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120141248
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120141248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
DZR
Mating_C
Motif
Other DBs
NCBI-GeneID:
120141248
NCBI-ProteinID:
XP_039012107
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MEFDGIDCMTSSDVIDDDDDDELHHRHNQLASLLKSHSNNGSSNSIVPSAAQSSTTSVHE
LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLEL
PCKYTSLGCPEIFPYYSKLKHEALCNFRPYNCPYAGSECAVVGGIPFLVAHLRDDHKVDM
HSGCTFNHRYVKSNPREVENATWMLTVFHCYGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
VEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL
KLRVTGRIWKEQQNPEGGACIPNLCS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgatggcattgattgcatgacatcttcggatgtgattgatgatgatgatgat
gatgagcttcatcatcgtcataatcagttggcttcattgttgaagtcccatagcaacaat
ggaagcagcaacagtattgtgccatcagcggctcagtcgagcaccaccagtgtccatgaa
cttcttgaatgccctgtttgtaccaattctatgtaccctcctatccatcagtgccacaat
gggcatactctctgttcaacctgtaaaacaagggtacacaaccggtgccccacttgtaga
caggagcttggtgatatcaggtgtctagcactagagaaagtagccgaatcactcgaactg
ccttgtaaatatacatcacttggatgcccggagatctttccttattacagtaaactcaaa
catgaggccttatgtaacttcaggccatacaattgcccgtatgctggatcggaatgcgct
gttgttggtggtattccattccttgttgctcatctaagggatgaccacaaggtggacatg
cattctggatgcacattcaaccatcgttatgtgaagtctaatcctcgtgaagtagaaaac
gcgacatggatgttaaccgtattccactgttatggccaatacttctgcctccatttcgaa
gccttccagcttgggatggcccctgtttatatggcattccttcgtttcatgggtgacgag
gttgaagcccgcaactacagttacagcctagaagttgggggcaatggaaggaaactcatt
tgggaaggcactcccagaagcataagagatagccacagaaaggtcagggatagccatgat
ggccttattatacagcgtaacatggcgcttttcttctccggaggagacagaaaagagttg
aagctgcgagtaactggacggatatggaaagaacaacagaaccctgaaggcggtgcctgc
atacccaacctttgcagttaa
DBGET
integrated database retrieval system
