Hibiscus syriacus (Rose-of-Sharon): 120141295
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Entry
120141295 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel homolog
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120141295
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120141295
Membrane trafficking [BR:
hsyr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120141295
Ion channels [BR:
hsyr04040
]
Other channels
Mechanosensitive channel (Piezo)
120141295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Piezo_TM25-28
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
120141295
NCBI-ProteinID:
XP_039012144
LinkDB
All DBs
Position
Unknown
AA seq
2475 aa
AA seq
DB search
MDFTCFSFLEAALSNWSLISLFDLIAFLLIQYTAPKIGFRFRRQYLLLWPVIIFSLLVFL
SQALYLVVWAVKGYKQSVGEAWWMKLIGFTIIHSWKSPTVVYFLVVQLLAGFVALLDIRD
NRFGLVPWQYSCWSRFLTAIEHLGSHLRVASCLLLPAIQLAVGISHPSWVSLPFFVGSCV
GLVDWSLTSNFLGLFRFWRALQLYAGFIIVLLYLHQLPLEFSNMLQRIAEFVGLFKISST
SEWPEICSAASLLHFYIMLSYVKYDLEEMDVIMSMQESNLTEQLLPSKHSFFIRESRSGV
RHTNVLLRQVVFRTFTINFFTYGFPVSLFALSFWSFHFASLCAFGLLVYVGYILYSFPSL
FHLHRLNGLLLVFILSWAVSTYIFNVAFAFLNRNFGKDMEIWDMIGFWHYPIPGLFLLAQ
FCLGILVALGNLVNNSVFLYLSDEAALSSNNCTVEVDGETKVFIVATIAWGLRKCSRAIM
LALIFIIAMKPEFIHAVYIIFFLIYLLSHNISRKIRGSLILLCEAHFALVYLLQIDLISD
ALEQKGSWSLEIMSHLGMSPXSKLVELSEIALLGCVCAIHNRGFEVLFSFSAIVQHSPCP
PFGILLIIGFSILRAGLNKSVLLSVYVSPHTSFCHDNLSYERTIASFLSGIGQNFLSMYR
ACGTYIALLTILLTVLMVTPNYISFGYIFLLLVWIIGRQLGDRTRNRLWFPLKTYAVMVF
IFVYSLSSFSSFRIWLSGFMDLHFYLGYEPEASLLDNIWQSLAVLIVMLLYSYERRKNNR
AGFANPLYSGVLGFTRRFLIWHSQKILFVALFYASLSPISAFGFLYLLGLIICSTLPKAS
RIPSKSFLVYTGFLVTTEYLFQMWGKQAGMFPGQKHSDLSLILGLRAYELGFWGVESGLR
GKVLVISACILQYNVFFWLDNMPSVISNRGNWDEPCPLFLSAEDAFTNGFLFNREDMSST
VGMVPIREVKEANNSWSSLNAALSQATPTVSSKAGGSEVSSMGKCSLGYLWGSGKESHKW
KKKKILVLREERFETQKALLKICLKFWIENMFNLLGLEINMIALLLASFALLNAISMLYI
VVLVVCVLLDRWIIRKLWPVLVFFFASILILEYIALWKSMFPLNQPNQTEIRCHDCGKSS
ASYFQYCRSCWLGLIIDDPRMLISYFLVFLLACFKLRADQSPYFSGSSTYLQMTSQRENL
FVWXELSFETKSTWTFLDYIRLYCYCHLLDLVLVLILITGTLEYDILHLGYLAFALVFSR
MRLEILKKKNKMFKFLCIYNFAVIVLSLAYQSPFVREFSSGKCKTVNLYEVIGFSKYDYG
FRITSRSVLVEIIIFMLVSLQSYMFCSQESAYVSRYLEAEQIGAIVREQEKKAAWKTAQL
QQSIESEEKQHQRNLQVENMKSEMLNLQIQIHSTNSTATLRDLSHDDEGLQSRTVSLTSN
RDVGPPEKEENTLWKQKRVLKEDSVFPLDARAYAAHIKGENPEVVEPPKNSMEYRPCEIS
EIEHDADCAIFDTGKRRKSRSKDNPLISAVNLLGDGVSHVQSIGNQAVNSLANFLNIKSE
DSDMNEGSSVKGEAYDETESQKMQNMHLNHSSSRKSDKSSDATSLQLRRILCHIWSQMQS
NSNVVCYCLFVLVFLWNFGLLSMVYLAALFLYALCVNTGPTYIFWVIMLIYTEVYILLQY
MYQIVIQHCGLSVNSDLLRNIGVPTCEIKSSFVVCSLPLFLVYLFTLIQSSISAKDGEWM
FSTDFNFNKWSSFYRKEVLVNYSWRKRVSKSLQFVINMVKQVIRRFFWYWKSLIQGAETP
PYFVQVSMDVHLWPNDGVQPERVESGINHLLRVVHDKRCTEKVRGHCPLASRVQVQSIER
SQEDQNVALVVFEVLYASRLIGCMPGGWYKSLTPAADVAKEILQARHAGFVEEMGFPYQI
LSVVGGGKREFDLYAYIFVADLTVFFLVAIFYQSVIKNNSDLLNVYQLEDQFPIEXVIIL
MIIFFLIVVDRILYLCSFATGKVIFYLFNLVLFTYSITKCAWQMEPSGQHAGRLAIRAIF
LAKAVSLALQGVQIRHGIPQKITLYMQFLTSKISIINYLAYRLYRALPFLYELRCVLDWS
CTTTSITKYDWLKLEDINASLYLAKCDAVLNRAKHRQGEKQTKMTKCCNGIFLFFILICV
IWTPMLMYSSGNPTNIANPIKDASFHIDIITNGGRLTLYQTTLCEKLEWDKLNSDVNFDA
YNKNDIQLIRCLADAIIFWLVSDVVKRRFIEFLDWDRDMVITSTWLLTRERPKGKEVVKY
EKPVDSEDLPEPSDIQKVLNGSTISFRVYNLYPRYFRVTGSGEVRSFEQEVTSCAISVSA
DLVINRAAFEWWSFHDLNSSHVRNCGGWTGPMAIVVSEETPPQGILGDTLSKFSIWGLYI
TFVLAVGRFIRLQCSDLRMRIPFENLPSCDRLIAICENIYAARAEGELGVEEVLYWTLVK
IYRSPHVLLEFTKPD
NT seq
7428 nt
NT seq
+upstream
nt +downstream
nt
atggattttacctgtttttcttttcttgaagctgcattgagcaactggagtttgatctct
ctttttgatttgatagccttccttctcattcagtatactgcacctaaaataggatttcgc
ttccggaggcaatatttgttactttggccagttatcatcttttccctacttgtttttctt
tcacaagctttatatctcgttgtatgggctgttaaaggttacaaacagagcgtaggtgag
gcttggtggatgaaactaattggttttacgataatccattcttggaaatctcctactgtg
gtttatttcttggttgtacaactgctagcgggatttgttgctttgcttgatatacgtgat
aatagatttggtcttgtcccatggcagtattcttgttggagtcgtttcttaacagctatt
gaacatttaggttcccatcttagagttgcttcctgtttgcttctgcctgctattcagctg
gctgtgggaattagccatccttcatgggtttctttgccattttttgttggtagctgtgtt
gggctagtggattggtctctgacaagcaattttctaggacttttcaggttctggagggct
ctccagctttatgcaggcttcatcattgtcttgctttatttgcatcagctccctttagag
ttttcaaatatgttacaaaggatagctgaatttgttggtctattcaaaatatcttcaacg
tctgagtggcctgaaatttgctccgctgcctctcttctacatttttacatcatgctatcc
tatgtcaaatatgatttggaggaaatggatgttatcatgtccatgcaagaaagtaacttg
acagagcaactacttccctcaaagcattcattcttcattcgtgaatcaagatctggtgta
aggcataccaatgttttactacgacaggtagttttccggactttcaccatcaactttttc
acttatggttttccagtatccttatttgctctttccttttggagttttcattttgccagt
ctatgtgcttttgggctacttgtatatgttggctacattctatactcctttccttccctg
tttcatttacaccggttaaatgggctccttcttgtcttcattctttcgtgggctgttagc
acctatatattcaatgtggcatttgcattcttgaataggaattttgggaaggatatggaa
atttgggatatgattggattttggcattatcccataccaggattatttttgcttgcacag
ttttgtctcggaattctggttgctttgggtaatctcgtaaataactcggttttcctctac
ttatctgatgaggctgcactatcatcaaacaactgtactgtggaagtggatggagagacc
aaggtattcatagtggctacaattgcatggggactacggaaatgttctcgagcaatcatg
cttgctctgatatttatcatagcaatgaaacctgaatttatccatgctgtatacataatt
ttctttttgatctatcttttgagccacaacatcagcagaaagatacgcgggtctctgatt
cttctttgtgaagctcactttgcattagtataccttcttcagattgatttgatctctgat
gctttggagcaaaaaggctcctggagtttggaaataatgtcgcatttaggtatgtctcct
taatcaaagctcgtggaactttctgaaatagctttgcttggttgcgtttgtgcaattcat
aaccgtggatttgaggtgctattttcattctcagcaattgtgcagcacagcccttgtcct
ccttttgggattttattaatcattgggtttagcatcttgagagctggtttaaacaaatct
gtcctcttgtcagtatatgtatccccacatacatccttctgccacgataatctttcttat
gagagaacgatagcatcattccttagtggaattgggcagaattttttatcaatgtataga
gcatgtggaacctacattgctctgctgactattcttcttacagttctcatggtaacaccc
aactatatatcgtttggatacatcttccttcttcttgtttggataattggaagacaactt
ggtgacagaacaagaaatcgcttatggtttccattaaaaacatatgctgtcatggtgttc
atttttgtctatagcttaagcagttttagcagctttaggatttggttgtctggatttatg
gatctgcatttttatttgggttatgagcctgaagcttcattgttggataatatttggcaa
tctctagcagttttaattgtgatgctactttatagctatgaaaggagaaagaacaacagg
gctggttttgccaatcctttatattctggggttcttggctttactaggcgatttctgatt
tggcacagtcagaagatcctgtttgtcgcattattctatgcgtctttgtctccaatttct
gcttttggattcttgtatctacttgggcttatcatatgttcaactttacctaaggcttct
cggatcccatccaaatcattcttagtttataccggatttctggtcacaacggagtatctt
tttcagatgtggggtaaacaagctggaatgtttccagggcaaaaacattctgatctgtca
ctcattctgggtctccgtgcgtatgagctgggattttggggtgtagaatcgggcttgagg
ggaaaggtgctggtaatttctgcttgcatccttcagtacaatgttttcttttggttggat
aatatgccaagtgttatttcaaacagaggcaattgggatgagccttgtcctttatttttg
tcagcagaggatgccttcactaacggcttcttgtttaatagggaagatatgtcatctact
gttggaatggtacctataagagaagtcaaagaagcaaacaattcgtggtcatctttgaat
gctgctttatctcaagcaactcctaccgtgtcctccaaagcaggaggctccgaggttagc
agcatgggaaaatgttcattaggatatctctggggaagcggcaaggagagtcataagtgg
aaaaagaagaagatccttgttttaagggaagaaagattcgaaacacagaaggctctccta
aaaatatgtttgaaattctggatagaaaacatgtttaaccttcttggtcttgagattaac
atgattgctttgcttcttgcgagtttcgctttgttgaatgccatatctatgctatatatt
gtggtgcttgttgtttgtgtccttttggatcgttggataatacgtaaactctggccggtg
cttgtattcttctttgcttccattctcatccttgagtatattgccctctggaagagtatg
tttcctctgaatcaaccaaatcagactgaaatacgttgccatgactgcgggaagagctca
gcttcatatttccagtattgtaggagctgttggctaggactgatcattgatgatccccga
atgcttataagctactttttggtctttctgctggcttgcttcaaacttcgtgcagatcag
tctccctatttctcagggtcatcaacatatttgcaaatgacgtctcaacgtgaaaattta
tttgtttggtgagaactctcttttgaaaccaaaagcacgtggacctttcttgactatata
agactttattgttattgccatctattggaccttgtcctggtactgattttgattactgga
actcttgagtatgatattctgcaccttggttatcttgcttttgctcttgtattttctcgg
atgagacttgaaattctcaagaagaagaataaaatgttcaaattcctgtgtatctacaac
tttgcggtcatagttctttctcttgcctatcaatctcctttcgtacgggagtttagttct
gggaagtgcaaaactgtcaacttatatgaagtcattggattttcaaagtatgactatgga
tttcgaattacttccagatctgtacttgtggagattatcatatttatgttggtatctctt
cagtcatatatgttttgctcccaagagtctgcttacgtgtcaagatatcttgaagcagag
caaattggtgcaattgtacgtgagcaagagaaaaaagctgcatggaaaactgcacagtta
caacagagtattgaatctgaggagaagcaacatcagcgcaacttgcaagtggagaacatg
aaatctgagatgcttaacttgcaaatacagattcatagcacgaactcaactgcaactctg
agggatttgtctcatgatgatgaaggcctacagagtagaactgtttctctgacctcaaat
cgggatgttgggcctcctgaaaaagaggaaaacactctttggaagcaaaagcgagttctt
aaggaggattcagtatttcctcttgatgcacgtgcatatgctgctcatataaaaggagaa
aatcctgaagtagtggaaccccctaagaattcaatggaatatagaccttgtgagatcagt
gaaattgaacatgatgctgattgtgctatttttgatacagggaaaaggaggaaaagccga
tcaaaggacaatcctttaatttctgctgtaaacctcctaggtgatggtgtttcacacgta
cagtctattggaaatcaggcagttaatagccttgctaatttcctgaacataaaatctgaa
gattcagatatgaatgagggatcttctgtcaagggtgaggcatatgatgagacggagagc
caaaagatgcagaatatgcatttgaaccattcttcttctcgaaaatctgataaaagttct
gatgctacaagtttgcagctgagaaggatcttatgccatatatggtcccaaatgcagtct
aatagcaatgttgtgtgctactgcttatttgtccttgtttttctatggaacttcggttta
ctttctatggtgtatcttgcagctcttttcttgtatgctctatgtgtgaatactggtcca
acttatatcttctgggttattatgctaatttacacagaggtttatattttgcttcagtat
atgtatcaaattgtaatccagcattgtggattgagtgtgaattcagaccttctacgtaac
ataggggttcctacttgtgaaatcaagtcatcttttgttgtgtgttcgttgcctctattt
cttgtctacttatttaccctcatacagagctctataagtgcaaaagatggtgaatggatg
ttctctactgactttaacttcaataaatggagttctttttatagaaaagaggttcttgtg
aactacagctggagaaaaagggtatcgaagtctctccaatttgtaataaatatggtgaaa
caagtaattagaagattcttctggtactggaaatcattgatacagggagcagaaactcca
ccttattttgttcaagtgtcaatggatgttcacttgtggccaaatgatggggttcagcca
gaaagggtcgagtctggaataaatcatctgctcagggtagttcatgataagagatgtact
gaaaaagtccgaggtcattgtccacttgctagtagggttcaggttcaaagcattgaaaga
agtcaagaagatcaaaacgtggctttggttgtttttgaggtgctttatgcatctcgtttg
ataggatgtatgccaggaggttggtacaagtctctaactccagcagctgatgtggcaaaa
gaaattctccaggcacggcatgctgggtttgttgaagagatgggattcccataccaaata
ctctctgttgttggtggtggaaaaagggaatttgatctctatgcttacatatttgttgct
gatcttaccgtgtttttcttggttgcaattttctaccaatctgtcataaagaacaacagt
gatcttctaaatgtttatcaactagaagatcaatttcctatagagnntgtgattatctta
atgatcatctttttcttgattgttgttgatcgcatactttatctctgttcattcgccaca
ggaaaagttattttctatctttttaatcttgttctcttcacgtattcaattacaaagtgt
gcttggcagatggaaccttccggccagcatgctggacggctagcaatccgtgctatattt
cttgctaaagcagtttctttagcacttcagggtgtacaaattcgacatggaattcctcag
aaaatcaccttgtatatgcagtttttgaccagcaagatttcaataattaattacctagcc
tatagactatatcgggctctaccatttctttatgaattacgatgcgtacttgattggtca
tgcacaacgacatctataaccaagtatgactggctcaaactggaagatataaatgcaagt
ttgtaccttgccaaatgtgatgccgtgttgaatagagctaaacacagacaaggagagaag
caaacaaaaatgaccaagtgctgcaatgggatatttctgttctttatattaatttgtgtc
atttggactcctatgctgatgtacagcagtggcaatccgacaaatattgcaaatcccatc
aaagatgcaagttttcatatagacattattactaatggtggaaggttgaccttgtatcag
acaactctctgtgaaaagctcgaatgggataagctcaattctgatgttaattttgatgcc
tacaataagaatgatatacaattgatacgctgcctagctgatgcaattattttttggctt
gtctctgacgtggttaagagaaggtttattgagttccttgactgggatagggacatggtt
ataacttctacttggctgcttacaagagaacgaccaaagggcaaggaagtcgtgaaatat
gagaaacctgtcgattccgaagatcttcccgaaccatcagatatccaaaaggttctcaat
ggttctacaataagctttagggtgtataatctctatccaagatacttccgtgtcaccggt
tctggtgaagttagatcttttgagcaagaggtaacttcatgtgctatttcagtgagcgca
gatcttgttatcaatcgtgcagctttcgagtggtggtcgttccatgatctcaattcgtct
catgtaaggaactgcggaggttggactggaccaatggccattgtagtatccgaagaaaca
cctccgcagggcattcttggagacacgctgagcaagttcagcatttggggtctctacatt
acttttgtgcttgctgttggtcgctttatcaggcttcaatgttccgacttaagaatgagg
ataccgtttgaaaacctaccttcctgcgacaggttgatagccatctgcgaaaatatatat
gctgcaagagcagagggtgagcttggagtagaagaagtcctttactggaccctagtgaag
atttataggtcacctcacgtgctgcttgagttcaccaaacccgactag
DBGET
integrated database retrieval system
