Hibiscus syriacus (Rose-of-Sharon): 120141308
Help
Entry
120141308 CDS
T09559
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120141308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120141308
04147 Exosome [BR:
hsyr04147
]
120141308
04090 CD molecules [BR:
hsyr04090
]
120141308
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120141308
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120141308
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120141308
CD molecules [BR:
hsyr04090
]
Proteins
120141308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
RsgA_GTPase
ABC_ATPase
Zeta_toxin
AAA_21
DEAD
DUF87
AAA_24
AAA_15
APS_kinase
AAA_30
DUF815
AAA_7
DLIC
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
120141308
NCBI-ProteinID:
XP_039012159
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MASENGFNGDKDTDLHEASASNGQEETEKGSGVNGENQDPERSKGDGKANTVPFYKLFSF
ADSKDILLMITGTIAAAGNGLSMPLMTILFGNLIDSFGKNQSNGNVIEEVSKVSLRFVYL
AMGAAVAAFLQVTCWMITGERQAARIRGMYLKTILRQDVGFFDVETNTGEVIGRMSGDTV
LIQDAMGEKVGKFSQLISTFLGGFVIAFVKGWLLTLVMLSAIPLLVLSGGTIAITISKMA
TRGQNAYAKAATVVEQTIGSIRTVASFTGEKQAINNYNKSLITAYKSGIQEGTAAGLGVG
LVMLIIFCSYALAVWFGGKMILEKGYTGGQVLNVIMAILTGSMSLGQASPCMSAFAAGQA
AAFKMFETIKRKPEIDAYDTSGKVLEDIRGDLELRDIYFSYPARPEEQIFSGFTLSILSG
TTVALVGQSGSGKSTAISLIERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLF
TSSIRDNIAYGKEGATTEEIRAAADLANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVA
IARAILKNPRILLLDEATSALDAESERVVQEALDRIMGNRTTVIVAHRLSTIRNADTIAV
IHQGKMVEKGSHSELLKDPEGAYSQLIRLQEVNKRPEQVADVSDVTPESFRQSSLRRSLK
RSISKGSSRNSSSRNSFSTPFGLPTEMNVTDPAMLDTEGHDGPPSKQAPEVSLLRLAYLN
KPEIFVILIGTMFAAANGVILPVFGILISSMIKTFYEPHDELKKDSRFWALIFLALGMAS
FFIYPIRSYFFSVAGCKLIQRIRSTCFEKVVRMEVGWFDEPQNSSGSIGARLSADAASIR
ALVGDALAQLVSSLASAVAGVVIAFIASWQMAFIILALIPLVGVNGYIQAKFMKGFSADA
KMMYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPIKTGLRQGLISGTGYGLSF
FFLFSVYATSFYAGAQLVEHGYTTFTDVFRVFLALTMAAVGISQTSSFAPDSNKAKIAAA
SIFAIVDRKSKIDPSDESGRTLENVKGDIELRHVSFKYPSRPDIQIFQDLSLSIHSGKTV
ALVGESGSGKSTVISLLQRFYDPDSGVITLDGVEIQTLQLKWLRQQMGLVSQEPVLFNDT
IRANIAYGKGGNATEAEIVAASELSNANNFISALQQGYDTIVGERGLQLSGGQKQRVAIA
RAIIKSPKILLLDEATSALDAESEKVVQDALDKVMVDRTTVVVAHRLSTIKNADVIAVVK
NGVIVEKGKHDTLINIKDGFYASLVALHTTASTSQIP
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgagaatggtttcaatggtgataaagataccgacttgcatgaagccagcgca
tcaaatgggcaggaagagacagagaaaggctctggagtgaatggagaaaatcaagatcct
gaaaggagcaaaggagatgggaaagctaacacggttccattttacaagctgttttcattt
gcagactctaaggatatcttgttaatgatcaccggcacaattgctgcggctgggaatggt
ctatctatgcccctcatgacaatcttgtttgggaatctcattgattcttttgggaaaaac
cagagcaatggcaacgtgattgaagaagtgtccaaggtttctttgagatttgtttacctg
gcgatgggggctgccgtagcggcgtttcttcaggtgacttgctggatgatcacaggcgag
agacaggctgcacgaatacggggcatgtacttgaaaacgatattgaggcaagatgttgga
ttctttgatgtggaaacaaacacaggggaagttattgggagaatgtctggggacactgtt
ctcatacaggatgctatgggtgaaaaggttgggaagttttcacaattgatatccactttc
cttggaggctttgttatagcctttgtcaaaggatggcttcttaccctagtcatgttatct
gctatccctctacttgtattatctggtggaactatagccattacaatatccaagatggca
actcgtggacaaaatgcttatgctaaagccgctactgtagttgaacaaacaattggttca
attcgaactgttgcgtcatttactggagagaagcaagccataaacaattacaacaagtca
cttattacagcttataaatcaggcatccaggaaggtactgctgctggattaggtgttggc
ttagttatgctaattatattctgcagttatgctttggctgtctggtttggtgggaagatg
attttggagaaagggtacactggcggtcaagtacttaatgtgattatggccatattaacc
ggttccatgtccctgggtcaggcatctccttgcatgtctgcattcgctgctggtcaagct
gcagcgtttaagatgtttgagaccatcaaaaggaaacctgagattgatgcctacgacaca
agtggtaaagttttggaggacattcgcggtgatttagaactgagggatatttatttcagc
taccctgccagaccagaggagcaaattttcagtggattcactctttctattctgagtggc
acaacagttgctttggttggacaaagtggaagtgggaaatcaactgcgatcagtctgata
gagagattttatgatccacaagccggtgaggttcttattgatggcattaatctcaaggag
ttccagcttagatggatacgaggaaagattggtcttgttagccaggaaccagtgttgttt
acgtcaagcataagggataatattgcatatggaaaagaaggtgcaaccacagaagagatt
agagctgcagctgatcttgcaaatgctgctaagttcattgataaactacctcagggacta
gataccatggttggagagcatggaactcagctttctggcggacagaagcaacgagtggca
attgcaagagcaattttgaagaatcctcggattttacttttagacgaagctacaagtgca
ctcgatgcagaatctgaaagagttgtgcaagaggcgttggacaggataatgggcaatagg
actactgtcatcgtcgctcatcgtttgagtaccattagaaatgcagataccattgctgta
attcatcaaggaaagatggttgaaaaagggtcacattcagaactactcaaggatcctgag
ggagcttactctcagcttattcgtttacaagaagtaaataaacgtccggaacaggttgca
gatgtatcagacgttactccagaatcgtttagacagtcaagcctaagaagatcattgaag
cgatcaatcagcaagggatcatctagaaatagcagcagccgcaattctttctccactcct
tttggtttacctactgaaatgaatgtcactgatcctgcaatgttagatacggaaggccat
gatggaccaccatcgaaacaggctccagaggtttccctcctccggcttgcttacctcaac
aagccggagattttcgtgatcttaattggaacaatgtttgcggctgccaatggtgtgata
cttccggtttttggaatccttatttccagtatgatcaaaacattttatgaaccacatgat
gaattgaagaaagattcaagattctgggcactgatatttttggcccttggcatggcatca
ttctttatatatccaattcgatcatacttcttttctgttgctggatgtaaattaatccaa
cgaatcagatcaacatgttttgagaaagtggtccgcatggaagttggttggtttgatgaa
ccccagaattcaagtggttcaatcggcgcaaggctctcagcagatgcagcctcaatacgt
gccctggttggagatgcactagctcagctggtctcaagcttagcatcagccgtggctggt
gtggtcattgctttcattgcaagttggcagatggcatttattatcttagcactaatccct
ctagtaggggtaaatggatatattcaagcgaaattcatgaagggatttagtgcagatgca
aaaatgatgtacgaggaagctagccaagttgctaatgatgcagttgggagtataagaacg
gttgcgtccttttgtgcagaggaaaaggtaatgcaactctataaaaagaaatgtgaggct
cctataaaaacagggttaaggcagggtttgatcagtggaacgggatacggactttctttc
ttctttttgttttccgtttatgcgacaagtttctatgcaggagctcaacttgttgagcat
ggctatacgacttttacagatgtttttcgagttttcttagctttaacgatggcagctgtt
ggaatttctcaaacaagctctttcgctcctgactctaacaaagccaagatcgccgctgct
tccatatttgcgattgttgaccgtaagtctaagatagacccaagtgacgagtctgggagg
acactagaaaatgtaaagggagatattgagcttcgtcatgtgagttttaagtatccgtca
aggccagatattcaaatcttccaggacttaagtttgtctattcattctggcaagacggtt
gcactggttggagaaagtgggagtgggaagtctacagtaatctcattattgcagaggttt
tacgatcccgattctggagttatcactcttgatggagtcgaaatccaaacgctccaattg
aaatggctgaggcaacagatgggacttgtgagccaggaacctgttttatttaatgataca
atccgtgccaacattgcatatggaaaaggaggaaatgcgactgaggcagaaattgtagct
gcatcagagttgtccaatgctaacaacttcatcagtgcattacaacagggttatgatact
attgtgggagagcgaggacttcaattgtcgggaggacagaagcaacgtgtagccattgca
cgagccatcattaaaagtccgaagatactgctattagacgaggccacaagtgcactagat
gctgaatcagagaaagtggtacaggatgcactagataaagtcatggtggaccgcacaacg
gttgtagttgctcataggctatccacaatcaagaacgcggatgttatcgccgtcgttaag
aacggagttatcgtagagaaaggaaagcatgacactttgataaacatcaaagacggtttc
tatgcttccttagttgcacttcacacgactgcttccacttcacaaattccgtaa
DBGET
integrated database retrieval system
