Hibiscus syriacus (Rose-of-Sharon): 120141312
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Entry
120141312 CDS
T09559
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120141312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120141312
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120141312
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
120141312
NCBI-ProteinID:
XP_039012162
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MQKKMMYSFPDDVLEHVFSFIQSDKDRNAVSAVCKLWYEIERWCRRKVFIGNCYAVSPRV
VIKRFPEVRSIELKGKPHFADFNLVPDGWGGYVLPWIVEMAGAYPCLEEIRLKRMVVTDE
SLELIAKSFKNFKVLVLFSCEGFSTDGLAAIAAGCKNLRELDLRESEVDDLSGHWLTHFP
ETCTSLVSLNISCLGSDEVSFSALERLVGRCPNLKSLRLNRAVTLDKIANILRRAPQLVD
FGTGNYASELPPDVLLNLAGAFSSCKELKSLSGFWDVVPAYLPALYSVCSRLTSLNLSYA
TIQNPEIIKLVSRCPSLQRLLVLDYIEDSGLEALASSCKDLQELRVFPSDPFGGEPHVSL
TEQGLVTVSLGCPKLQSILYFCHRMTNAALVTIAQSCPNLTRFRLCIIEPKTADYLTLEP
LDVGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLFG
CESLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCTVSFGACKLLGQKMPRLNVEVID
ETEPPDSRPESCPVEKFYIYRSVSGPRFDKPPFVWTMDEEGKIMH
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaaaatgatgtattcctttccggatgatgtgctggagcacgtcttctctttc
atccaatccgataaagaccgaaacgcggtatcggcggtgtgtaaattgtggtacgaaatc
gaacgttggtgtcggaggaaggtgtttatcgggaactgttatgccgtgagtcctagggtg
gttatcaagcggttcccggaagttagatccattgagctgaaagggaagccgcacttcgcg
gacttcaatctggtgccagacggttggggtggttacgttcttccgtggatcgttgagatg
gccggcgcttacccttgtctcgaagagattcggcttaaaaggatggtggttacggatgaa
agcttggagcttatcgctaagtcatttaagaatttcaaagtgctggtgcttttttcttgc
gaagggttttcaaccgatggacttgctgccattgctgctggttgcaagaatctgagagag
ctggacttgagggaaagtgaagtggatgatttgagcgggcattggcttactcattttcct
gagacatgcacatccttagtgtccctaaacatttcttgcttgggatctgatgaagttagt
ttctcagccttggagcgcctggtgggtagatgtcccaacctgaagtctcttcggctcaac
cgtgcagttacccttgataagattgccaacattttacgtcgtgcaccacagttggttgat
tttggcactggaaactacgcttccgagctaccgcctgatgtcttgttgaacttggctgga
gctttttctagttgcaaggagttaaagagcttgtctggattttgggatgtggtcccggct
tatcttccagctctttattccgtctgctctagattaacgtctctgaacttaagctatgct
accatacagaatcctgaaataatcaagcttgtaagccgttgcccaagtttgcagcgcctt
ttggtacttgactacattgaagatagtggccttgaagcacttgcttctagttgtaaggac
ctacaggaattacgtgtgttcccatctgacccatttggtggagagccgcatgtatccttg
actgaacaaggccttgtcactgtttctttgggttgtcctaagctacagtcaattttgtat
ttctgccatcggatgactaatgcggcattagtcaccatagcccagagttgtccgaactta
actcgttttcgtctttgtataattgagcctaaaacagctgattacctgaccctcgagcca
cttgatgttggttttggagccattgttgagcattgcaaggatctcaggcggctttccctc
tccggtctcctcacagatcgagtatttgaatatatcgggacatacgcaaaaaaactagaa
atgctgtctgtggcttttgcaggagacagtgatttaggactccatcacgtgcttttcggc
tgtgaaagcctccggaaactagagataagggactgcccttttggggacaaggctcttttg
gccaatgctgcaaagctggagacaatgcgatccctttggatgtcatcttgcactgtgagt
ttcggtgcatgtaagctgctaggtcagaagatgcccagactgaatgttgaagttatagat
gagacggaacctccagattcaagacccgaaagttgcccagttgagaagttctacatatat
aggtcagtgtcggggccaaggtttgacaagccaccttttgtttggacaatggatgaagaa
ggtaagattatgcattga
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