Hibiscus syriacus (Rose-of-Sharon): 120141453
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Entry
120141453 CDS
T09559
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120141453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120141453
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120141453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_2
TIP49
AAA_22
AAA_16
RNA_helicase
AAA_14
AAA_28
nSTAND3
AAA_33
NPHP3_N
IstB_IS21
AAA_17
AAA_18
Bac_DnaA
Nucleolin_bd
Rad17
Mg_chelatase
Parvo_NS1
Viral_helicase1
ATPase_2
AAA_3
ABC_tran
NB-ARC
NACHT
AAA_19
Cytidylate_kin2
AAA_11
AAA_7
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
120141453
NCBI-ProteinID:
XP_039012247
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MGRRMGGGRSPAASSSVLNHRILSHRLQSCQLSYSTVDEIVDHLRTNYPDYKRIKQQPFT
RAVQQALQSSSKHTQKTPSSHSVFKFDDDSDGHEHAIAASSSSPSLSRSRKKLKRTDVTE
QRLQRLEESHIERRRIQRDDSCSSSETDSSSSSEEVDDEVPTSEDVIYGEKEEPKYDLTK
SMLRHSYNQSNNTKSKFEEKNIEMEVAANKNKDKIDMINQAGAGKKYAKASVKAATAADA
VEVNGKEGPRFRDLGGMGAVLEELMMEVIVPLYHPRLPRWLGVRPMAGILLHGPPGCGKT
KLAHAIANETSVPFYKISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASK
RENMQREMERRIVTQLMTCMDESHRLLQPNDKDSSSENSDSKPGYVLVIGATNRPDAVDP
ALRRPGRFDREIVLGVPDENARCEILSVITRNLRLEGSFDLLKIARATPGFVGADLAALA
NKAGNLAMKRIIDQRKHVISKESIDEEQADQWWRQPWLPEEMEKLTITMADFEEAAKMVQ
PSSRREGFSTIPNVKWEDVGGLDFLRQEFDRYIVRRIKFPEEYAEFGVDLETGFLLYGPP
GCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVD
ALTTKRGKEGGWVVERLLNQLLIELDGSDQRRGVYVIGATNRPEVMDRAVLRPGRFGKFL
YVPLPSPDERGLILKALARQKPIDADVDLSAIGRTEACDNLSGADLSALMNEAAMGALEE
KLTSTGISEASWTIKTLHFEHALNKISPSVSDKQKQFYKALSESFKAG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaagaatgggtggcggccgctcacctgccgcttcctcctcagttcttaaccac
aggatactcagccaccgactccaatcttgtcaactgtcatactccaccgtcgatgaaatc
gtcgaccaccttcgaactaactaccccgattacaaacgcatcaagcaacaacctttcacc
agggccgtccaacaagccctccaatcctcttccaaacacacccaaaagacgccttcttca
cattctgttttcaaattcgatgatgacagtgatggacatgagcatgccattgcagcttct
tcttcctcgccttctctttcgcgttcgcggaagaagcttaagagaaccgatgtgactgag
caaaggttgcaacgtttagaagagtcgcacattgaaaggagacggattcagcgcgatgac
tcatgctcgagctcggaaacggactcatcatcttcatcggaagaagtagatgatgaagtt
ccgacttcggaagatgttatttatggagaaaaagaggaacccaagtatgatttaacgaaa
tcaatgctacggcacagttacaatcaatccaacaacacaaaatcgaagtttgaagaaaaa
aatatcgaaatggaggttgcagctaataaaaataaggataaaattgatatgatcaatcaa
gctggagctggaaaaaaatatgcaaaggcttcggttaaggccgctactgctgctgatgct
gtggaggttaatgggaaagaggggccgaggtttagggatttaggtgggatgggagctgtg
ctggaggagttgatgatggaagtcatagtacctctttatcatccacgtttgccacgatgg
ctgggagttaggccaatggctggaattttgctccatggcccacctggttgcggcaagacc
aaattggcccacgccattgccaatgaaactagtgttccgttctataaaatttcagctacc
gaggtggtttcgggtgtctcgggtgcatcagaggaaaatattagggaactcttctcaaaa
gcatataggactgctccttcaattgttttcatcgatgagattgatgccattgcatctaaa
agagaaaatatgcagagggagatggagcggagaatcgtcacacagttgatgacttgtatg
gatgaatctcacagacttttgcaaccaaatgataaggattctagttcagagaactctgat
tccaagcctggctatgtgcttgtgattggagctaccaatagacctgatgctgttgaccct
gcactacggaggcctggacgatttgatcgggagattgttcttggtgttccggatgaaaat
gccaggtgtgagattctttctgtgattacacgaaatcttaggcttgaagggtcttttgat
cttttgaaaatagcaagggctacaccaggttttgttggagcggatttggctgccttagct
aacaaggctggtaatcttgccatgaagaggatcatagaccagagaaagcatgtgatttct
aaagaatctattgatgaggagcaagctgatcagtggtggaggcagccttggttgcccgag
gagatggaaaaactaacaatcactatggctgattttgaggaagcagctaaaatggttcag
ccctcatcacggagagagggattctctacaattccaaatgttaagtgggaggatgttggt
ggtcttgacttcctaaggcaggaattcgaccgttacatagttagacgcataaaatttccc
gaggaatatgcggaattcggagtggacttggagacaggatttttgctttatggaccacca
ggctgtggtaaaacgttgattgcaaaggctgtagctaatgaggctggagccaatttcatt
cacatcaagggccctgaacttttgaataaatatgttggagaaagtgagctggcagttcgg
acattgtttagccgtgctaggacatgttctccgtgcatacttttctttgatgaggtggat
gctttgaccacaaagcgagggaaagagggtggatgggttgttgaacgacttctgaaccag
ttgctcattgagttagatggatcggatcagcggcgcggtgtttatgttataggtgccact
aatagacctgaagtgatggatcgtgctgttttacggcctggtagatttggtaaatttctt
tatgtacctcttcccagtcctgacgaacgtgggttgatcttgaaagctcttgctaggcag
aaacccatagacgccgatgtggatttgagtgcaattggacgaacggaggcttgtgataat
ttaagtggggctgatctttctgcactgatgaatgaagcagccatgggtgcactggaagag
aaactgacttcaacagggatatctgaggcttcatggacaatcaagacattgcatttcgag
catgcactgaataagatctcaccatcggtgtccgataagcaaaaacagttctataaggca
ttgtcagagagcttcaaagcgggttga
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