Hibiscus syriacus (Rose-of-Sharon): 120141518
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Entry
120141518 CDS
T09559
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120141518
Spliceosome [BR:
hsyr03041
]
Complex B
Other components
Complex B specific factors
120141518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
LisH_TPL
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_SPT8
Ge1_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
DUF7165
Beta-prop_VPS8
VPS8_N
PROPPIN
Beta-prop_IP5PC_F
zf_topless
Beta-prop_IFT122_2nd
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
120141518
NCBI-ProteinID:
XP_039012293
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL
PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL
LVRTYFDPNEAYQDSTKEKRRAQIAQAIAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDIDDMHPTTLSHTIKFGKKCHAECARFSPDGQFLVSSSVDGFIEVW
DYISGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMIASGSQDGKIKVWRIRTGQCLRR
LERAHSQGVTSLVFSRDGSQLLSTSFDSTARIHGLKSGKLLKEFRGHTSYVNDAIFTADG
SRVITASSDCTVKVWDVKTTDCLQTYKPPPTLRGGDASVNSVHLFPKNTDHIIVCNKTSS
IYIMTLQGQVVKSFSSGKKEGGDFVAACVSPKGEWIYCVGEDRNMYCFSYQTGKLEHLMT
VHEKDVIGITHHPHRNLVATYAEDCTMKLWKA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgactctagaaatcgaagctcgagacgttattaagattgtgctccaattttgcaaagaa
aattcgttgcatcaaacgtttcaaacgctacaaaacgagtgccaggtttctctgaatact
gtagacagcatcgaaacgtttgttgctgatattaacagtggaagatgggatgccatattg
cctcaagtggctcaacttaagctcccaaggaacaaattggaggacttatatgagcagatt
gtattagaaatgattgaactaagagagttggacactgcacgtgctatattgaggcaaacc
caggcaatgggggttatgaaacaggagcaacctgaaagatacttgaggcttgagcacctc
cttgtcagaacttattttgatccaaatgaggcttaccaggattcaacaaaggagaaacgt
cgtgcacaaattgcccaagccattgctgccgaagtgagcgttgtgccaccttctcgttta
atggctttgattggtcaagctttaaagtggcagcaacatcaaggtttgcttcctccagga
acacaatttgacttatttagaggaacagctgctatgaaacaagacatagatgacatgcat
ccaacaaccttatcacatacaatcaagtttgggaagaaatgtcatgcagaatgtgctcga
ttctcaccagatgggcaatttcttgtttcttcttctgttgatggttttattgaggtctgg
gattacataagtgggaagctcaagaaggatcttcaataccaagctgatgaaactttcatg
atgcatgatgatcctgtactctgtgttgattttagcagagattcagagatgattgcatct
gggtcacaagatggaaaaataaaggtttggcgcataagaacaggtcaatgcttgcgccgt
cttgaacgtgcacactctcaaggtgtgacaagtcttgtcttctctcgtgatggaagccag
ttactaagtacatcttttgatagtactgcaagaatccatggattgaaatctggaaagttg
ctcaaagaattccgtgggcatacatcttatgtgaatgatgcaatatttacagctgatgga
agtcgtgttattactgcctccagtgactgcactgtgaaggtgtgggatgtaaaaacaaca
gactgcctgcaaacatataaaccaccgcctactttaaggggtggtgatgcttcagtgaat
tcagttcatcttttcccaaagaacacagatcatattattgtttgcaacaagacatcgtca
atatacatcatgacacttcaaggacaggttgtgaaaagtttctcatctggtaaaaaggag
ggtggagattttgtggctgcctgtgtctcaccaaaaggtgaatggatatattgcgtgggc
gaggacaggaatatgtactgcttcagctatcaaactggaaaattagagcatctaatgacg
gtccatgaaaaggatgtaataggcatcacacaccatcctcacaggaaccttgtagctacc
tatgctgaagattgcaccatgaaattatggaaggcttga
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