Hibiscus syriacus (Rose-of-Sharon): 120141623
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Entry
120141623 CDS
T09559
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120141623
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120141623
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120141623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
HTH_63
Motif
Other DBs
NCBI-GeneID:
120141623
NCBI-ProteinID:
XP_039012368
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MSMREALLGFFLVFIAFFSEIASATVVFKPFSISLPDLPAKFAVGNNTSVCGALEVAVPL
DACTTLRNEFGSNKSDTVRFALIIRGNCSFEEKIRNAQNGGFSAAIVFDDKYSSNLVYMM
VNPKGINVLAVFISKSSGEFLKDRARGEKGECCIYPPLNGKAWTVFAICFLSLVVIAAFL
VIAFIAPRSLSNWRRRNLVKCVDTKTVEALPCVVFSSDHASTYAETCAICLEDYNDGELL
KVLPCQHDFHSSCVESWLTKWGTFCPVCKLDMTTKFAYSEHVTKIQFFYILSFIAKIRIL
IRHIFLSLNSLHIHSTGQEEQQGLESIIFNTIFWLVFYQECFLCLQVPSPSEVCFCTGLF
TSCTNCLG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgagggaagctttgcttggatttttcttagtatttattgctttcttcagcgaa
atagcttctgctaccgttgtttttaagccgttctctatttccttgccagaccttcctgcc
aaattcgctgttgggaataacacctccgtctgcggtgctcttgaagtggcggttcccttg
gatgcttgcacaacgctccgaaacgaattcggatccaataaaagtgacactgtaaggttt
gctttgataattagaggcaattgttctttcgaggagaaaatccgaaacgctcaaaatggg
ggattttctgccgcaattgttttcgatgataaatatagtagcaatttagtctacatgatg
gtgaaccctaaaggaatcaacgtgctagctgtttttatttctaaatcttctggtgaattt
ttgaaagatcgtgctagaggtgaaaaaggggaatgctgtatttacccacccttgaatggg
aaggcgtggacggtctttgctatttgtttcctatcacttgttgttatagcagctttcttg
gtgatagcctttattgctccccgaagcttgtcgaattggcgaagaagaaatttagtaaaa
tgtgtggatactaaaacggttgaggctcttccttgtgttgtgttcagttccgaccatgcc
agtacttacgcagaaacttgtgcgatttgccttgaggattataatgatggggaacttctt
aaagtgcttccttgtcaacatgattttcattcaagttgtgtagagtcatggctgactaag
tggggaacattctgccctgtatgcaaactcgatatgacaaccaagtttgcatattctgag
catgtcacgaagatacaatttttctacattctctcctttattgcaaagataagaatctta
atccgacatatcttcttgtcactgaactctcttcatattcattcgacaggtcaagaggag
cagcagggtttagaatcaattatttttaacacgatcttttggcttgttttctatcaggag
tgctttctgtgcttgcaagtgccatccccatcagaagtttgtttctgcaccggtctattc
acatcatgcacaaattgtctgggatga
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integrated database retrieval system
