Hibiscus syriacus (Rose-of-Sharon): 120142003
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Entry
120142003 CDS
T09559
Name
(RefSeq) zinc finger CCCH domain-containing protein 24-like
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120142003
Transfer RNA biogenesis [BR:
hsyr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120142003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
zf-CCCH
Methyltransf_4
RRM_1
Methyltransf_15
Ubie_methyltran
MTS
Methyltransf_11
Lectin_N
PCMT
Ish1
UPF0184
PrmA
zf-CCCH_2
Torus
Cons_hypoth95
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
120142003
NCBI-ProteinID:
XP_039012697
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MAASPNNQLSETKTLDSQSNGLDSTQVDPQPLHEAIPPSDPQSAADSNPREKRKPEDQDQ
NTNSSTHPLWKTTLCSYFRRQDGSCSHGSTCRYAHGEEELRPRPYNTWDPTSERAKKAMK
GENGEKLDAKHEEEQEVIMTEMVMDGEDGEECGDPQLSKCLVHLPRKWHADNLRKFLSEQ
GITFKSAKKKKGMVVGFVSFESADQLKSAVEVLEGKSFANKSLKVADVIPRSFERKVKSA
MAATLSFQQNSEDALVKVNASVSNALNEVEDGVPNDDGSANDDSTSKVKSACDAVTPLAH
MPYIDQLEHKKNSVMQMLKKLTRNARKACPSGVSLPEWVLKSKERGGLPCELEGIIESPV
VHGYRNKCEFSVGYSRQGKPTVGFMLGNFREGVTAVEEPVDCPNVSKIASKYASILQEFL
QHSSLPIWNRFKNTGFWRQLTVCQRGRSVGKVADKNFEDDISEVMLIVQICLIGIDNAQI
TSEFERLAQAFAAGAATNSPPLPLTVFVVQDHQGISNVAPTDAPLRSIPILKTENSIGPE
TANNVVEARIHDCISNLRFSISPTAFFQVNTLAAEKLYSLAGEWAGLGPDTLLFDVCCGT
GTIGLTLAHRVGMVIGIEMNASAVQDAYKNAEINGIKNCRFICSKAEDVIGSLLKEYLNV
SEKQDQLSSSLESSAKGTLSCEEKDSCTTNAHKDGEISCQEPENRSSENNRKELLQESST
STDGNSLVQQFKNVVAIVDPPRMGLHPTVVKALRTHARLRRLVYISCNPESLVANAIELC
TPSPEKVEKGKKDNRGWRNMSSAGLARHRAKSMPISEPFQPVKATIVDLFPHTPHCEMVM
LLER
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctccaaataaccaactttctgaaactaaaaccctagactcccaatccaac
ggcctagattcaacccaagtagacccccaacctctacacgaagcaataccgccgtccgat
ccccaatcagcggccgactccaatccaagagagaaacgcaagccagaggatcaagaccag
aacacgaactcgtcgacccaccctctgtggaaaaccaccctttgctcttacttcaggcgt
caagatgggtcctgcagccatggcagcacgtgcaggtacgcccacggcgaggaggagctc
cgcccgcggccctataacacgtgggacccgacatcggagcgagcaaagaaggcgatgaaa
ggggagaatggagagaagttggacgccaaacacgaagaggagcaagaggttataatgacg
gaaatggtcatggatggtgaagatggcgaagagtgtggagaccctcaattaagtaaatgc
ttggtgcatttgccaaggaaatggcatgcggataatttgaggaaatttcttagtgaacaa
ggaattacttttaaatctgcaaagaaaaagaaaggcatggtggttggttttgtgagtttt
gaaagcgctgaccagttgaaaagtgcagttgaggttctggaaggaaagtcttttgccaac
aagagtttaaaggttgcagatgtcattcctcgatcatttgagaggaaagtgaaatcagca
atggctgcaactctgagcttccaacagaatagtgaagatgcattggttaaggtgaatgca
agtgtttcaaatgctttaaatgaggttgaagatggtgtgccaaatgatgatggttctgca
aatgatgattcaacctcaaaggtgaaaagcgcttgcgatgcagtcactccacttgctcat
atgccctatattgatcagttggagcacaagaagaattctgtcatgcaaatgctcaaaaaa
cttactagaaatgcacgcaaagcttgtcctagcggtgtttcacttcctgaatgggttctt
aaatctaaggaacgaggtggtcttccatgtgaactagaaggtataattgaatctccagtt
gtacatggataccgcaacaagtgtgagttttctgttggatattctcgtcagggtaaaccg
actgtggggttcatgctgggaaattttagggagggtgtgacagctgttgaagaacctgtg
gactgcccaaatgtttcgaaaattgctagcaaatatgcttcaatcttgcaggaatttttg
cagcattcaagcttaccaatttggaacagatttaaaaatactggattttggcgtcagtta
actgtatgtcagagaggaagatcagttgggaaggttgcagacaaaaattttgaggacgat
atttcagaggtcatgctcattgttcagatttgtttgattgggattgacaatgcacaaata
accagtgagtttgagagacttgctcaagcttttgcggcaggtgctgccacaaattctcct
cctctgcctctaacagtttttgttgttcaggatcatcaaggaatatcgaatgtggcacca
actgatgctccattgcgatcaatacccatcctgaaaacagaaaacagtattgggccagag
acagccaataatgttgtagaagcaaggattcacgattgtataagcaacctccggttctca
atatctccaacggcattttttcaggtcaatactcttgctgcagagaaattatattcactt
gctggtgaatgggctggtttgggtcctgataccttgttgtttgatgtatgctgtgggact
ggaacaattggactcacgttagcccatcgtgtcggtatggttattggcattgaaatgaat
gcttctgctgttcaagatgcttataagaatgccgagattaatgggataaaaaattgtaga
ttcatctgttcaaaggctgaggatgtaatagggtctctgttgaaggagtacctaaatgtt
tctgaaaaacaagatcaactttcaagttccttagaaagtagtgcaaaaggaacattaagc
tgtgaagagaaagattcgtgcacaaccaatgcacataaagatggagagatctcatgtcaa
gagcctgaaaaccgttcttcagaaaataacagaaaagagctccttcaggaaagttccacg
tcaacagatggaaattctttggtgcagcaattcaaaaatgttgttgctattgttgatcct
ccacgtatgggacttcatcccactgtggtcaaagctttacgaactcatgctcgattacgc
aggcttgtgtatatttcttgcaatcctgaaagcttagtggcaaatgccattgagctctgc
acaccatctcctgagaaagttgagaaagggaagaaagacaatcggggctggaggaacatg
agtagtgctggcttagcacgacacagagccaagtccatgcctatttcagagcctttccaa
cctgtaaaagcaacgattgttgatcttttcccacatactccacactgtgaaatggtgatg
ctcttggagcgatag
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