Hibiscus syriacus (Rose-of-Sharon): 120144285
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Entry
120144285 CDS
T09559
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120144285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120144285
03009 Ribosome biogenesis [BR:
hsyr03009
]
120144285
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120144285
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 related factors
120144285
Complex B
120144285
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Helicases
120144285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
Motif
Other DBs
NCBI-GeneID:
120144285
NCBI-ProteinID:
XP_039014318
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MACAATASFGPRYAPPDPTLPKPWKGLVDGKTGYLYFWNPVTNVTQYERPTSGDSVPKPS
FTPISSSVHVQESFEGHHGYNPGKENDWGEKDSEAISNQNARSGPIHSHNTPNVTSNSVI
GGPSAKGQGSVGGGRNLSGDAYRCQHEITVTGDEVPMPFSSFESTGLPSEILREVRNAGF
SAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLMPGFMHIKQFRKDPQMGPTVLVLSP
TRELATQIQDETRKFGNLSRISCTCLYGGAPKGPQLREVEKGIDIVVATPGRLNDILEMR
KISLQQVSYLVLDEADRMLDMGFEPQIRKIVKEVPIRRQTLMFTATWPKEVRKIAADLLV
NPVQVNIGNIDELVANKSITQHVEVLSPMVKHKRLEQILSSQEPGSKIIIFCSTKRMSDQ
LACNLSRFGAAAIHGDKSQADGDYVLGQFRSGRTPVLVATDVAARGLDVKDIRLVINYDF
PTGIEDYVHRIGRTGRAGATGLAFTFFGDQDSKHASDLIKILEGANQKMPAELHEMASRG
DGMGRPRCWTPSSGGDNGGCGGRTDSGYGGRDGGRGGRVTSTFSSWHERSGGHGYGHESG
DRNDHGFHDSYDQGRNRSRSRSPDRFVSGSGHEPSPVLSFHEMMMKRDRSYP
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcgctgcgactgcctcttttggtccccgttatgctccacctgatcccactcta
cccaaaccatggaaaggcctagttgatggtaaaactggttatctttacttttggaatcct
gtaacaaatgtcacacaatatgaaaggcctacaagtggtgattctgtcccaaaaccttct
tttacacctataagttcttcagttcatgttcaagagtcttttgaaggtcatcatggttat
aatcctggcaaggaaaatgattggggtgaaaaggatagtgaagccatatcaaaccagaat
gctagaagtggaccgattcattcccataatacacctaatgtgacttccaactctgtaatt
ggaggaccttctgcaaaggggcaaggatccgttggtggtggaagaaatttgtctggtgat
gcttatcgctgtcagcatgagataacagtaactggagatgaagtgcccatgcctttttca
tcatttgaatctactggattgccttctgagatacttagagaggtacgcaatgctggattt
tctgctccaactccaattcaggctcaatcatggccaattgcattgcaaggtagagacata
gtggccattgcaaaaactggttccgggaaaacattgggttaccttatgcctggatttatg
catatcaagcagttccgtaaggatcctcaaatgggtccaactgtattggtattatcacct
accagggagctggctactcagatacaagacgaaactcgcaagtttggcaatttgtcaaga
attagttgcacatgtttgtatggaggggcacccaaaggtcctcagttgagagaggttgag
aaaggaattgatattgtggttgctactcctggccggttaaatgatattctcgagatgcgg
aaaatcagcctccaacaagtttcttaccttgtgttagatgaggctgatcgcatgttagac
atgggttttgaacctcagatacggaagattgtgaaagaagtgccaatccgcaggcagacg
ctcatgttcacagcaacatggccaaaggaagttcggaaaattgcagcagacctactggta
aatcctgttcaggttaacattggcaatattgatgagcttgtggcaaacaagtctattacg
cagcatgttgaagtattatcaccaatggtaaaacacaaaagacttgagcagatactaagc
tcccaagaaccaggatccaagataattattttttgttcaaccaagaggatgtctgatcaa
cttgcttgcaacctcagtcggtttggagctgctgctatccatggtgacaaatctcaggct
gacggggactatgtgcttggtcagttccgatctgggaggacaccagtgcttgttgcaact
gatgtagctgctcggggtctggatgtaaaggacatcaggttggtaatcaactatgacttc
cctactggaattgaggattatgttcataggattggaaggactggaagggcaggtgcaact
ggattggcatttacattctttggtgaccaggattcaaagcatgcttcggatctcatcaaa
attctagagggagcaaaccagaagatgcctgcagaacttcatgaaatggcttcacgtggt
gatggcatgggaaggcctagatgttggactcccagttctggtggcgataatggaggatgt
ggtggacgcactgactcaggttatggtggtagggatggtggaaggggtggtcgagtaact
tctacattctctagctggcatgaaagaagtggaggccatgggtatggtcacgagtctggt
gacaggaatgatcatggtttccatgatagttatgatcagggacggaatcgcagccggagt
cgtagccctgacaggtttgttagtggttcaggacatgaaccttccccagtgctcagtttt
catgagatgatgatgaaacgtgatcggtcatatccgtag
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