Hibiscus syriacus (Rose-of-Sharon): 120144300
Help
Entry
120144300 CDS
T09559
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120144300
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120144300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
120144300
NCBI-ProteinID:
XP_039014333
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MDFSTCSVFHVLFISLLVPYLVSSSAVPDPESVVDDVHKSINASRRNLGYLSCGSGNPID
DCWRCDPNWERNRQKLADCGIGFGKNAMGGKNGRIYVVTDAGDDDPLNPKPGTLRHAVIQ
DEPLWIIFKSDMVITLKEELVMNSYKTIDGRGTSVHISGGPCITIHYVSNIIIHGINIHD
CKPGGSSTIRDSPEHAGHWDQSDGDGVSIFNSKNIWVDQCTLSNCQDGLIDVIHGSTAVT
ISNNYMTNHDKVMLLGHSDEYTQDKDMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSANPTINSQGNRFLAPDDSSKKEVTKHEDAPESEWRSWNWRSEGDLMLNGA
FFRQTGVGATSTYARASSLSARPSSLVGPMTATAGALNCRIGSHC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcaacatgttcagtctttcacgttctcttcatttccctccttgttccatat
cttgtttcttcttccgcagttccagaccccgaatccgtcgtggacgacgtccataagagt
atcaatgcttctaggaggaacttgggttacttatcatgtggatcagggaaccccattgat
gattgttggaggtgcgacccgaattgggagcgcaaccgtcagaagttagctgactgtgga
attggattcggaaagaatgctatgggcggtaaaaatggtcgaatctatgtcgttacggat
gccggagacgatgatcccttgaaccctaaacctggtacattaaggcatgctgtgatccaa
gacgagccattgtggatcatattcaagagtgacatggtgattacattgaaagaagagttg
gtgatgaactcttacaagacgatcgacggacgaggcacgagcgttcatatatcgggaggg
ccatgcattaccatacattacgtatcgaacatcatcatccatgggatcaacatacatgat
tgtaagcccggagggagtagcactataagagactcacctgagcatgctggccattgggat
caatcggatggtgatggagtatccatctttaacagcaagaatatatgggttgaccagtgt
acgctctctaattgtcaagatggactgattgatgtcatccatggatccactgcagtcacc
atctcaaacaactacatgaccaatcatgataaagtcatgctgttgggacacagtgatgag
tatacacaagacaaagacatgcaagtcactgttgcctttaaccatttcggagaaggcctg
gtacaaagaatgccaaggtgccgacacggatactttcatgtggtgaacaacgattacaca
cactgggagatgtacgccatcggtggaagtgcaaaccctactatcaacagccaagggaat
cgatttctagcaccagatgacagttcgaagaaagaggtgaccaaacacgaggatgcgccg
gaaagcgagtggagaagctggaactggagatcggagggggatttgatgttgaacggagcc
ttcttcaggcagaccggagttggtgcaacttcgacctatgcaagggcttcaagtctgagt
gctagaccgtcttctcttgtgggtccaatgacggccacagccggtgcactaaattgtagg
attggatcccactgctag
DBGET
integrated database retrieval system
