Hibiscus syriacus (Rose-of-Sharon): 120144301
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Entry
120144301 CDS
T09559
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120144301
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120144301
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
120144301
NCBI-ProteinID:
XP_039014334
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MDLSTFSVFHILFISILVPYLVYSSAVPDPESVVDDVHKSINASRRNLGYLSCGSGNPID
DCWRCDPNWERNRQKLADCGIGFGKNAMGGKNGRIYVVTDAGDDDPLNPKPGTLRHAVIQ
DEPLWIIFKSDMVITLKEELVMNSYKTIDGRGASVHISGGPCITIHYVSNIIIHGINIHD
CKPGGSSTIRDSPEHAGHWDQSDGDGVSIFNSKNIWVDHCTLSNCQDGLIDVIHGSTAVT
ISNNYMTNHDKVMLLGHSDEYTQDKDMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWKMYAIGGSANPTINSQGNRFLAPDDSSMKEVTKHEDAPESEWRSWNWRSEGDLMLNGA
FFRQTGAGATSTYARASSLSARPSSLVGPMTATAGALNCRIGSHC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcaacattttcagtctttcacattctcttcatttccatcctcgttccatat
cttgtttattcttccgcagttccagaccccgaatcggtcgtggacgacgtccataagagt
atcaatgcttctaggaggaacttgggttacttatcatgtggatcggggaacccaattgat
gattgttggaggtgtgacccgaattgggagcgcaaccgtcagaaattagctgattgtgga
atcggattcggaaagaatgctatgggtggtaaaaatggtcgaatctatgtcgttacggat
gccggagacgatgatcccttgaaccctaaacctggtacattaaggcatgctgtgatccaa
gacgagccattgtggatcatattcaagagtgacatggtgattacattgaaagaagagttg
gtgatgaactcttacaagacgatcgacggacgaggcgcgagcgttcatatatcgggaggg
ccatgcattaccatacattacgtatcgaacatcatcatccatgggatcaacatacatgat
tgtaagcccggagggagtagcactataagagactcacctgagcatgctggccattgggat
caatcggatggtgatggagtatccatctttaacagcaagaatatatgggttgaccattgt
acgctctctaattgtcaggatggactgattgatgtcatccatggatccactgcagtcacc
atctcaaacaactacatgaccaatcatgataaagtcatgctgttgggacacagtgatgag
tatacacaagataaagatatgcaagtcactgttgcctttaaccatttcggagaaggcctg
gtacaaagaatgccaaggtgccgacacggatactttcatgtggtgaacaacgattacaca
cactggaagatgtacgccatcggtggaagtgcaaaccctaccatcaacagccaagggaat
cgatttctagcaccagatgacagttcgatgaaagaggtgaccaaacacgaggatgcgccg
gagagcgagtggagaagctggaactggaggtcggagggggatttgatgttgaacggagcc
ttcttcaggcagactggagcaggtgcaacttcgacctatgcaagggcttcgagtctgagt
gctagaccgtcttctcttgtgggtccaatgacggccacagccggtgcactaaattgtagg
attggatcccactgctag
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