Hibiscus syriacus (Rose-of-Sharon): 120144466
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Entry
120144466 CDS
T09559
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120144466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120144466
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120144466
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120144466
Atg1 complex
120144466
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120144466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
120144466
NCBI-ProteinID:
XP_039014435
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MASTHSSSHTEAAKMEQVITEFFYKSLFIILESRSPYVSSRNYSGEQTVSSPSSSSSSSS
SVRPRDKWFNLALRECPSALENLDLCRQSNFESVVVDVILDQKPLDWGPASFSPKRDLVG
NLSSKDKNSLFWNSDLEESGREIKSEKIVERWLVQHESRKGRDCNLGNRRSSCYNLSALY
KKLILLLRSLYVTVRLLPAYNIFRDLNSSGQICAFKMVPRVSSFVEPLNRKEEADMQRFW
FTPVDTSCGRLCVSVLYYSSISDISSESSTPMSPQFIPNYVGSPLADPLRRFPSLPMSHG
SSSSLPFSRRHSWSHDHYKASPPLVSFSPSPTHSESHASASNPISQPFPPMSLPPHPRET
SLAHKKVMNLDEHRPSPNFSTSPSPSPSPSPSLPIHIPRSHLSEALSRSESDPVDIPGPK
LANSPALSDKHNLPPSPPLKITRTGTSRTDNFRVPAETVTTIEKLYSFGKEDCRKYSRVK
ISSCSSPRISCSRSSSRSLQDDFDDFEFPCPFDVDDDEMTDPGSRAESYDKRAHSSDPNE
AGLFVNRKSQDAAVGALVLMLKKAPPLCQDTSLNFSEASRPEMWSNSIQKQSQISEAETV
EHAAASSTASSRLVASKTTADALEELRGYKAMKNLLLSEGGNAYTSASFDSAAEHSRISK
GT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaactcattcgagttctcacaccgaagcagccaaaatggaacaagttatcact
gaattcttctataagagtctttttataattcttgaatcgaggtctccttatgtgtcatca
cgtaattatagtggggaacaaactgtgtcgtccccgtcttcatcctcatcctcttcatct
agtgtgagaccaagagataaatggttcaatttagctcttagggagtgcccttcagcgcta
gaaaatcttgacctttgtcggcagagtaattttgagtctgtagttgttgatgttatattg
gaccagaagcctcttgactggggacctgcaagtttttcccccaagagggatcttgttggg
aatttgtcttctaaagataagaattcgcttttctggaattctgatctagaagaatcaggc
agggagataaaaagtgaaaagattgttgaaagatggttggtgcagcacgaaagtagaaag
ggtcgggattgtaatttagggaatagaaggtcaagttgttataatttgagtgcattatat
aagaaattgatattgttgttgaggtccttatacgtgactgtgaggcttttacctgcttac
aacatttttcgtgatctcaattcatccggtcaaatctgtgcctttaagatggttcctagg
gtatcttcttttgttgaacccttgaatcgtaaagaagaggctgatatgcagcgattttgg
tttacccctgtggacacatcttgcggaaggctttgcgtttctgttttgtactattcatca
atctcagatataagctccgaatcgtcaaccccgatgtcccctcaatttataccaaattat
gttggaagcccattggcagacccattgaggagatttccatctcttcctatgtcacatggc
tcttcatcatctttaccattttcaagaaggcatagttggagtcatgaccattacaaggct
tcaccacctttggtttctttctcaccatcaccaacacattcggagtcacatgcttcggct
tctaacccgatctctcagccgtttccgcctatgagcttacctcctcatcctcgtgaaaca
tcactagctcataagaaggttatgaacttagatgagcatcgtccttcccccaatttctct
acttccccatcaccatcaccatcaccatcaccatcactcccaatccacatacccaggtct
catttatcagaagctctttcacgctctgaaagtgatcctgttgacataccgggtcctaag
cttgctaattcccctgcattgtctgacaagcacaatttgccaccatcacctccccttaaa
attacaagaactggtacttctaggactgataattttagggtacctgctgaaactgttaca
acaattgagaagctgtactcttttgggaaagaggactgtcggaaatattctagagtgaag
atatcttcctgcagttcaccacgaatttcatgttctagaagttccagtaggtctttacaa
gatgattttgatgactttgagtttccttgcccatttgatgtggatgatgatgaaatgacg
gaccctggtagcagagccgagtcttacgataaaagggcacattcatctgatccaaatgaa
gctgggttgttcgtgaatagaaaatcccaagatgctgcggttggtgctcttgtccttatg
ctgaaaaaagcccctcctctctgccaggacacctcccttaatttttcagaagcctcaagg
ccagaaatgtggagcaacagcatccaaaagcagagtcagatctcggaagctgagactgtt
gaacatgctgctgcttcgagtactgcatcttcgaggcttgttgcatcaaagacaactgct
gatgcattagaggaacttcggggttacaaagcaatgaaaaacctgttgcttagtgaaggg
ggtaacgcatacacatcagctagttttgattctgcagctgaacattccaggatcagcaaa
ggtacatga
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