Hibiscus syriacus (Rose-of-Sharon): 120144602
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Entry
120144602 CDS
T09559
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120144602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120144602
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
120144602
SWR1 complex
120144602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
HDA2-3
Motif
Other DBs
NCBI-GeneID:
120144602
NCBI-ProteinID:
XP_039014562
LinkDB
All DBs
Position
Unknown
AA seq
2043 aa
AA seq
DB search
MASKGIKSKFENETKARRQKALEAHREPQRPKSHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGEKKLKEEEQRLRKVAFNISKDVKKFWMKIEKLVLYKHQMELD
EKKKKTLDKQLEFLLGQTERYSTMLAENLVDPSKPMQQHPAQNQINSPGKADMNETGEPL
DLNTDADEDFDVHSEQESEDDEQTLEEDEALITAEERQEELAALHSEIDLPLEELLRRYA
VETADGEGSPEKREDGNESVSVNDDSSNENLVSAYSKVETTDFLVRRSNESNGVLSKSEN
YSPDIEASSPRNLSESSGELLKDGPYDFSDEQEDGDFTLAGEETVHHMDDETTLSEEEEL
AKADFSDPMDEIVLLQKESEIPVEELLRIYKKDISAGGVSGDESDYASSLSEDRLDSPTH
QNVEARKEGISKGKNLESSAPLGVVEPPAEEAASPDRKSEDGKESEDRIADAAAAARSAQ
PTGNTFSTTNVRTKFPFLLKHPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIA
LLAHLACEKGIWGPHLIVVPTSVMLNWETEFLRWCPAFKILTYFGSAKERKLKRQGWLKP
NSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG
TPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMIEGQEKVNKEVVDRLHNVLRP
FILRRLKRDVEKQLPLKHEHVIYCRLSRRQRNLYEDFIASSETQATLASANFFGMISVIM
QLRKVCNHPDLFEGRPIVSSFDMGGINIQLSSSICSIFSPGPFSTVDLKGLGILFTDLNF
SMTSWEGDEVERLVTPKSLIEERFDQDNLEEIRPLSRHKDNLQGTNIFEEIRKALREERL
REAKERATSIAWWNSLRCRKKPIFPTTLRELLTVKHPAFDIHRQKADSRSYLYSSKLSEI
ILSSVERFQTMVHLVESFVFAIPAARSPTPVCWCSKMGTSVFLHPTYIEQCAENLFSLLA
PIRPAIVRRQVYFPDKRLIQFDCGKLQELEVLLRRLKSEGHRALIFTQMTKMLDILEAFI
NIYGYNYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSD
WNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTE
FFKKLDPMELFSGHRTLTVRSQKEKNHSNGTKDSVSNADVEAALKYAEDEADYMALKKVE
QEEAVDNQEFTEEAMSKLEDDEFANEDDMKADESTDQAGFMVTSNKDNGLILNVGDPIED
KALILASKEDDVDMLADVKKMAAAAAAGGQAISSLENQLRPIDRYAVRFLELWDPIIDKG
AMEPELKFEDEWELDRIEKYKEEMEAEIDDDEEPLVYEKWDADFATEAYRQQVALVQHQL
MEELEHEAKEKEEADEAKLDAMNEMTSEPKAKSKKKKPKKAKFKSLKKGSLNSEAKPAKQ
GALTELMSMDDDIDSPEELSYSDIMSPSSMQKKRKKVEIVHDSDEAKSSKKKPKKHKKPL
GELEPNTSRKRNGDCAEVNPCESNSVEHEQKPASRSKTGGKFSITSMPMKRVLIIKPEKL
KNANIWSKDCVPSPDSWLAQEDAILCAVVHEYGSNWNLVSDALYSMTAGGFYRGRYRHPV
HCCERFRELIQRHVLAAPDSLGNEKISYAGSGKALLKVTEDNMRMLLNFAAAQPDHELLL
QKHFTALLSSVWRVTLRPEHRQNVLSPRNGVRLGGRLLSPFIGHTPQRSSQYMTPRMKFS
NLHECSKLLSAAFHDASDRQRNEAVSLSNREDSQANEESLEITVEIERESNDSMIPFPPV
MNLLICGPNPVTSTNKTNGEDPHLKASNVLAENRFRAATMAGVEGGLHWASAAFPANDPK
SRSGQKSQSLGKHKLPVSDTTRSKSKLKKASMEHGDVSNLHAELVFQQACRIGLHNPNLR
SDPTLVNNDGSWVDGVDSNFCSSMDEAFASELEGFDVIPHNYSRGFISGLDDCSILPDYT
DIG
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaaggaatcaagtctaagtttgagaatgagacaaaagctaggcgtcaaaag
gctctggaagcacatagggagccccaacgtcctaaatcacactgggatcatgttttagag
gaaatggtttggttatcaaaggacttcgagtcagagaggaaatggaaactggctcaggca
aagaaggttgctttaagagccagtaagggcatgttggatcaggccaccaggggagaaaag
aagttgaaggaggaggaacaacggttacggaaagttgcatttaatatttctaaggacgtg
aagaaattttggatgaaaatagagaaactggttctttacaaacatcagatggagcttgat
gagaaaaagaaaaagacactggataaacaacttgagtttcttttagggcaaactgagagg
tactcaacaatgttagcagaaaatttagtggacccgtccaaacctatgcaacagcatcct
gctcaaaatcaaataaactctcctggtaaagcagatatgaatgagactggtgaacccttg
gacttgaatacagatgctgatgaagattttgatgtgcactctgaacaagaatcagaagat
gatgagcaaacactagaggaagatgaggctcttattactgctgaagaaaggcaagaagaa
ttggcagctttgcacagtgaaatagatcttccacttgaggagctcctcaggcgttatgct
gtggaaacagccgatggagaaggtagtccagaaaagagggaggatggaaatgagtcagta
tcagtgaatgatgatagtagcaatgaaaaccttgtttctgcttacagtaaagttgagaca
actgattttcttgttcgtcgttctaatgaaagcaatggtgtcttgtccaagtcagaaaac
tactcaccagatattgaggcatcttcacccagaaatctgtcagaaagctctggggagcta
cttaaagatggaccatatgatttcagtgacgaacaggaggatggtgattttacccttgct
ggagaagagacagtacatcatatggatgatgagacaacactatcagaggaggaggaacta
gcaaaagcagattttagcgatcctatggatgagattgtcttactgcagaaggagagtgaa
attcctgtggaagaattgcttcgaatttataaaaaggacatcagtgctggtggtgtgtct
ggagatgaatcagattatgcctcatctttatcagaggaccgcttggattcacctacacat
caaaatgttgaagcaaggaaggagggtatttctaagggtaaaaatcttgaatccagtgct
cccctgggagttgtggaacctcctgcagaggaggcagcaagccctgatagaaagtcagaa
gacggaaaggaaagtgaggatagaattgctgatgctgctgctgctgcaagatcagcacaa
ccaactggcaatacattctcaaccactaatgttcgtacaaagttcccttttcttctcaaa
cacccccttcgtgaatatcagcatattggcttggactggcttgttactatgtatgagaaa
aggttaaatggaattctagctgatgaaatggggcttggaaagacaatcatgacaattgct
cttcttgcacacttggcttgtgaaaagggaatatggggtcctcatctaattgtggttcct
acaagtgttatgctcaactgggaaactgagtttcttagatggtgtcctgccttcaaaatc
ctgacatactttggaagtgccaaagagcgcaaattgaagaggcaaggttggttgaaacca
aattcatttcatgtatgcataactacttacagacttgtcatacaagattctaaggtcttc
aagcgaaagaagtggaaatacttaatcttggatgaagctcatcttattaaaaactggaag
tcacaaagatggcaaactcttttgaacttcaattcaaaacggaggatcttgttgactggt
acaccacttcagaatgatctcatggaactatggtcactaatgcatttcctaatgccccac
atttttcagtctcatcaagaattcaaagattggttctgtaatcctatatcaggtatgata
gaaggacaagaaaaagtaaacaaagaggttgttgaccgtttgcataatgttctacgtcca
tttatactgcgtcgattgaaaagggatgtcgaaaagcagcttccattgaaacatgagcat
gtcatatactgtagactttcaagaaggcagcgtaacttgtatgaagatttcattgccagc
tcagagacacaagccacacttgctagtgccaatttttttgggatgatcagtgtgatcatg
caacttcgaaaagtctgtaatcatcctgacttatttgagggacgaccaattgtgagttct
tttgatatgggtggtattaatatccagttgagtagttctatttgttcaattttttcacct
ggtccattttcaactgtagatcttaagggtttgggaattttatttactgatctcaatttt
agcatgacatcttgggagggtgatgaagtagaaagactggttactccaaaaagtttaata
gaagaacgttttgatcaggataatcttgaggaaattagacccttgtctagacataaggat
aacttgcaagggaccaatatatttgaagagattaggaaggctttaagagaagagaggcta
agagaagcaaaagaacgagcaacatcaattgcttggtggaattctttgagatgcaggaag
aaaccaattttcccgacaacattacgtgaactgctaactgtgaaacaccctgcatttgat
attcaccgacaaaaagcagacagccgatcctatttgtactcctctaagctttctgagatt
attctttcttcagttgaacgcttccagacaatggtccatctggttgagtccttcgtgttt
gcaatcccagcagcacggtccccaactcctgtttgctggtgcagcaaaatgggaacttct
gtgtttctgcatccaacttatatagaacaatgtgctgaaaatttgttttctctcttagca
cctattagacctgcaatagtccggaggcaggtatattttcctgacaagcgattgatacag
tttgactgtggtaagttacaggagcttgaggttttgctacgaagactgaagtctgaaggt
catcgggcattaatatttacccagatgaccaagatgcttgacatattggaggctttcata
aatatatatggatataattacatgcgtctggatgggtccactcaacctgaggagagacaa
acattaatgcaacgtttcaacactaatcctaaaatttttcttttcatcttatcaacccgt
agtggaggagtaggtattaaccttgttggggcggatacagttatattttatgatagtgat
tggaatcctgccatggatcagcaagcccaagatcgttgccatcgaataggacagacacgt
gaagtgcacatatatcgtctaatcagtgagagcaccattgaagaaaacattttgaagaaa
gcaaatcagaagcgtgcccttgatgatctagttatacagagtggagggtataatactgaa
tttttcaagaagcttgatcccatggaattgttttcgggtcataggactcttacagttagg
agtcagaaagagaaaaatcacagcaatggcaccaaggactctgtttctaatgctgatgtt
gaagctgctttgaaatatgcagaagatgaagcagattacatggcattaaagaaagttgaa
caggaagaggctgttgacaaccaggagtttacagaggaagccatgagcaaactggaagat
gatgagtttgcaaatgaggatgacatgaaggctgatgagtcaactgatcaagctggattt
atggttacttcaaataaagataatgggctgattttgaatgtcggtgatcctattgaagac
aaagctcttattcttgctagcaaagaagatgatgttgatatgttggctgatgttaagaag
atggcagctgctgctgcggcaggaggacaagctatctcatcgcttgagaaccagttaaga
ccaattgatcgatatgcagtccgctttctggaattatgggaccccattattgacaaggga
gcaatggaacctgaattgaagtttgaagatgaatgggaacttgatcgaattgagaagtac
aaggaggaaatggaagctgagattgatgatgatgaggaacctctagtgtatgagaaatgg
gatgctgattttgctacagaagcatatcgtcaacaagttgctttggttcaacatcagtta
atggaagaactagagcatgaagccaaagagaaggaagaggcagatgaagcaaaattggat
gcaatgaatgaaatgactagtgaacctaaggctaaatctaagaagaagaagccaaagaaa
gccaagtttaagtctctcaagaaggggtctttaaattctgaagcaaaacctgcaaaacag
ggggcattaacagaacttatgtccatggatgatgatattgactcgcctgaagagctctct
tattctgatatcatgtcaccatcatctatgcagaaaaaacgtaagaaggtcgagatagtg
catgatagtgatgaagcgaagagctcaaaaaagaagcccaaaaagcataaaaagcctctg
ggggaattggaaccaaatacatctcgtaagaggaatggtgattgtgcagaggtaaaccca
tgtgagagcaattctgttgagcatgagcagaaacctgccagcaggagcaaaacgggaggc
aaattttccattacatccatgcccatgaaacgagtcttaattataaaaccagagaaatta
aagaacgccaatatctggtctaaagattgtgttccatcacctgattcttggttggcacag
gaggatgctattttatgtgcggtagtgcatgaatatggctcaaattggaatttggttagt
gacgctctctatagcatgactgctggtggcttttacaggggtagatatcgtcatccagtt
cattgttgtgagaggttcagggaactaattcaaagacatgttttggctgcaccagacagt
ttgggtaatgaaaagatcagctatgcaggttctggaaaagctcttctgaaagtaacagag
gataatatgcgaatgctgttaaactttgctgctgcacagccagatcatgagttacttctt
caaaagcattttactgccttgctttcatctgtgtggagggtgacacttcgccctgaacat
cgacaaaatgttttatcacctcggaatggtgttcgtttagggggaaggcttctcagtccg
tttattggccacacacctcagcgttcttcacagtatatgacaccaaggatgaaattttca
aatttgcatgagtgtagcaagttgttatcagctgcatttcatgatgccagcgatagacag
cggaatgaagcagtttctctctctaatagagaggattctcaggcgaatgaagaaagttta
gagataacagtggaaatcgagagggagagcaatgattctatgattccattcccaccagta
atgaatttattaatatgtggccctaatcctgttacgtctacaaacaagactaatggagaa
gaccctcatctaaaagcttcaaatgttttggctgagaatcgtttcagggcagcaactatg
gctggtgtcgaaggtggtctgcattgggcttcagctgcctttccagctaatgatcccaag
tctcggtcaggacaaaaatcgcagtccttggggaaacacaagctgcctgtatcggataca
accagatctaaatcaaaactaaagaaggcttcaatggagcatggtgatgtatccaactta
catgcggagctagtatttcaacaagcatgtagaattggactccataatcctaacttaaga
agtgatccaacattggtgaataatgacggaagctgggttgatggcgtagatagtaatttc
tgttccagcatggatgaggctttcgcatcagaattagagggcttcgatgtgattccacat
aattattcccgtggctttatttcaggccttgatgattgttcaatcctaccggactatact
gacatcgggtag
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integrated database retrieval system
