KEGG   Hibiscus syriacus (Rose-of-Sharon): 120144849
Entry
120144849         CDS       T09559                                 
Name
(RefSeq) protein RRC1-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120144849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsyr03041]
    120144849
Spliceosome [BR:hsyr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120144849
 Complex B
    120144849
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 CTK3 RRM_7
Other DBs
NCBI-GeneID: 120144849
NCBI-ProteinID: XP_039014737
LinkDB
Position
Unknown
AA seq 965 aa
MSSFSITRKKTPFQKHREEEEAKKKREEDETARLYEEFVSSFQGDNALGSKAFVRGGTIN
PNEKFKPDSEGEQSKDGVSVPKKGSRYVPSFLPPPLAAKGKESEKKKEEERPKEKEKGKS
RNIDHFMEELKHEQELRERRNQDREHWNDGRHSDNAAPSSRFDELPYDFDPSGKLPGSFD
DGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN
RADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGQMAIRSKEGSSIILSGPS
GPPVTSVPNQNSELVLTPNVPDIMVIPPDDDHLRHVIDTMALYVLDGGCAFEQAIMERGR
ANPLFSFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWVPPPLPTTKSP
EHEKESSATYAAGRSRRLEPERTLTDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAA
GEIVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESF
NDLYRSVTGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFLRSGNSGVASFHSIC
GNAPEIEKKISSEDAVDGIKANQDAALVMGKGAATKELMDLPLAELERRCRHNGLSLVGG
REIMVVRLLSLEDAEKQRNYELDDELKLRSSSSRHLSGQRNANAEPESLGLSEWIHYGED
DTHSERKVSVPLVETFPVPLPELKTFTKKDKIDPVLPASKWAREDDDSDDEEKRTSGSEN
AGDGPSKADELEFGTNMNTPAPSESAINEEQRQKLRRLEVALIEYRESLEERGIKNSEDI
ETRVAVHRKRLESEYGLTDSGEDTSGRRRRDRRDDARDTARKRHRSESQSKSPPRKLSNR
DRDRENGSEKEQERHRDRDRGRGRSHDLESERGRDRERGHHEKSGSKERDEHDRGRSRDR
DRRRR
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgagttcgttttcaatcacgcgcaagaaaacgcctttccagaagcacagagaagaggag
gaagccaagaagaagagggaggaagatgaaactgctcgattatatgaggagttcgtgtct
tcgtttcaaggtgataatgcgctcgggtcgaaggcatttgttcgaggtggaacaatcaat
cccaatgagaaattcaagcccgattctgaaggtgaacagtcgaaagatggggtatctgtt
ccaaagaagggaagtaggtatgttccatctttcctaccacctcctttggcagccaaagga
aaggaatctgagaagaagaaggaggaggagaggccaaaagagaaagagaagggaaagtct
cggaacattgatcattttatggaggagctgaagcatgaacaagaactgagggagaggaga
aaccaggatcgcgaacattggaatgatgggcgtcatagtgacaatgcagctccatctagt
cgctttgatgaactaccttatgattttgatcctagtggaaagctgcctggatcatttgat
gatggtgatcctcaaacgacaaatctgtatgttggaaatctctcaccaaaggtggatgaa
aattttcttcttcggacttttggaagatttgggcctattgctagtgtgaagattatgtgg
cctaggacagaggaagagcggagacggcaaagaaattgtggctttgtggctttcatgaat
agagctgatggacaagctgcaaaagatgaaatgcaaggagttgtagtatatgaatatgag
ttgaaaattgggtggggtaaatctgttgctcttccatcacaagcattacctgctccccca
cctggacagatggccattcggagtaaggagggtagttctattatcttatctggtccttca
ggcccgccagtcacatctgttccaaatcagaactctgaactggttcttactccaaatgtt
ccagatataatggttattccccctgatgatgaccatcttcgccatgtgatcgatacaatg
gctctttatgttcttgatggaggatgtgcttttgaacaagctattatggagaggggccgt
gccaatcctctcttcagctttttgtttgagcttggctcgaaggaacatacttactatgtc
tggagactatattcctttgctcagggtgatactcttcaaaggtggcggacagagcctttt
atcatgataactggtagtggaagatgggtaccacctcctctgccaactacaaaaagtcca
gagcatgaaaaggagtcaagtgccacatatgctgcaggaagaagcaggcggctggagcca
gaacgaacacttactgatcctcaaagggatgaatttgaggacatgctgcgggccttgaca
ttggagaggagtcagattaaggaagctatgggctttgctttggataatgctgatgctgct
ggagagattgttgaagttttgactgagtccttgacacttaaagagacaccaattccaact
aaagttgcacggcttatgcttgtctctgacattcttcataacagcagtgctcctgttaaa
aatgcatctgcataccgtaccaaatttgaagcaacattgcctgatataatggagagcttt
aatgacctttaccgcagtgtgacaggaaggatcacggctgaggcccttaaggaaagggtt
ctgaaagtgttgcaagtatggtcagactggtttcttttttcagatgcatatgttaacgga
ctgcgagctacttttcttcgatcaggaaactctggtgtggcctcatttcattccatatgt
ggtaatgcaccagaaattgaaaagaagattagttcagaagatgcagttgatgggattaag
gcaaatcaagatgcggctttggtgatgggaaaaggtgcagctacgaaggagctgatggat
ctcccacttgctgagctggaaaggcgttgtagacataatggattgtctcttgttggtggt
agagaaataatggttgtacgactcttaagtttggaagatgcagaaaagcaaaggaattat
gaactagatgatgagttgaagctccgatctagttctagcaggcatcttagtggtcaaaga
aatgcaaatgctgaaccagagtcgttgggattgtctgaatggattcattatggagaggat
gatacccattcagaacgcaaagtgtctgtacctctggttgaaacctttccagtcccactg
cctgaactaaaaacattcacgaagaaagataaaatcgatcctgttttgccagcctctaaa
tgggctagagaggatgatgacagtgatgatgaagaaaagagaacttctggaagtgagaat
gccggtgatggccctagtaaggctgatgaattggagtttggaactaatatgaacactcca
gcaccatctgaaagtgcaatcaatgaagagcagaggcaaaagttgagacgtctggaggtt
gctttgatagaatatcgagaatcccttgaggagcggggaattaaaaattccgaggatatt
gagacaagggttgctgttcatcgaaaacggttagaatctgaatatggtttaacagattct
ggtgaagatacttcaggaagaaggaggagagataggcgggatgatgcacgtgacactgca
agaaagcgacatcgcagtgaaagccagagcaagagccctccgcgaaaattatcaaacaga
gacagggatagagaaaacggttcagaaaaggagcaagaaaggcacagggatagggataga
ggtagaggtagaagtcatgacctggaaagtgaaaggggaagggacagggagcgaggccat
catgaaaagagtggaagtaaggaaagggatgagcatgacaggggtagaagcagggatagg
gataggagaaggcgatag

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