KEGG   Hibiscus syriacus (Rose-of-Sharon): 120145401
Entry
120145401         CDS       T09559                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120145401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120145401
   03041 Spliceosome [BR:hsyr03041]
    120145401
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120145401
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120145401
Spliceosome [BR:hsyr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    120145401
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 120145401
NCBI-ProteinID: XP_039015174
LinkDB
Position
Unknown
AA seq 505 aa
MAKKRKQRSSEPRPTKPTSNPQPNQKQQQEHPQYISDEDLNPELDEEQHLQEAEEEEEEE
VEVEEEVEVEEEVEEEVEDEDEDEEDEEEDDDDEESEQATNQTLVGSSNVSVQNGALKGT
DQEEQLDEEPFEKLLEPFGKDQLITLIKKAVDKHPEFISSVREFADADPAHRKIFVHGLS
WDTTAETLTAEFSKYGEIEECKAVTDRFSGKSKGYAFILFKHRSGARRALKQPQKKIGNR
VTSCQLASLGPVPAPPPNAPPSSEYAQKKIFVSNVSAELDPEKLLEFFRQYGEIEEGPLG
LDKQTGKPKGFALFVYRSVESARKALEEPHKNFEGHVLHCQKAIDGPKLTKGGYGGGPSV
GHHQQYHHHQQGAHQIQSHYHHAKKGKYSTSGSETGHLMAPSGPTAVGFNPGVAATDFNP
AAAPALNQALGQALTALLSGQGGLGLGNLLGGFGGAPVNQGAPAAGYGNQVAGGYGVQGG
YQNQQMGQGGAGRNQSGGSAPYMGH
NT seq 1518 nt   +upstreamnt  +downstreamnt
atggcgaaaaagcgaaagcaacgatcctctgaaccccgacccaccaagcccacgtcaaat
cctcaaccaaatcaaaaacagcagcaagaacatccccaatatatatccgacgaagatttg
aacccggaactagacgaggagcaacatctacaggaagcggaagaagaggaagaagaggaa
gtagaagttgaagaagaagtagaagttgaagaggaagttgaagaggaagttgaagatgaa
gatgaagatgaagaagacgaggaagaagatgatgatgatgaagaaagcgaacaagctaca
aaccaaactctagtcggttcctccaacgtctccgttcaaaatggagccctgaagggaacg
gatcaggaagagcaattggacgaggagccgttcgagaaacttctagagccattcgggaaa
gatcaattgattacccttattaagaaagctgttgataaacacccggaatttatctcgtcc
gttcgggagttcgctgatgcagacccggcccataggaagatcttcgttcatgggttaagt
tgggataccactgctgaaaccctcactgccgagttttcaaaatatggggaaattgaagaa
tgcaaagctgttaccgataggttttctgggaaatccaaaggttacgcttttattctattc
aagcatcggagcggggcacgccgggctttgaagcaacctcagaagaagattgggaataga
gttacttcttgccagttggcttcgctagggccggttccagcacctcctccgaatgctcca
ccttcttctgagtatgctcaaaagaagatttttgtaagcaatgtgtcagctgaattggac
ccagagaagctgctggagttttttagacagtatggggaaattgaagaaggtccattggga
cttgataagcagacagggaaaccaaaggggtttgccctttttgtatacaggtcggttgaa
agtgccaggaaggcactggaggagcctcataagaattttgaaggtcatgttttgcattgc
caaaaagccattgatgggccgaaattgactaaaggtggttatggaggaggtccttctgta
gggcatcatcagcagtaccaccatcatcagcaaggagcacatcaaattcagtctcattac
caccatgctaagaagggaaagtattcgacatctggatcagaaactggtcatttgatggct
ccatctggtcctactgcagtggggttcaaccctggagttgctgctactgattttaatcct
gctgctgcacctgctttaaaccaagcgcttggacaggctttgactgcattgctttctgga
cagggaggcttggggcttggtaatctgcttggagggtttggtggtgcccctgtcaatcaa
ggggcacccgctgcagggtatgggaatcaggttgctggaggttatggagtgcagggcggg
tatcaaaaccagcagatgggtcagggcggtgctggtaggaatcaatccggtggcagtgct
ccttacatgggacattag

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