Hibiscus syriacus (Rose-of-Sharon): 120145450
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Entry
120145450 CDS
T09559
Name
(RefSeq) THO complex subunit 4D-like isoform X1
KO
K12881
THO complex subunit 4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
hsyr03015
mRNA surveillance pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120145450
09122 Translation
03013 Nucleocytoplasmic transport
120145450
03015 mRNA surveillance pathway
120145450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120145450
03041 Spliceosome [BR:
hsyr03041
]
120145450
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120145450
TREX complex
120145450
Spliceosome [BR:
hsyr03041
]
Complex C
Other components
EJC/TREX
120145450
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120145450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
120145450
NCBI-ProteinID:
XP_039015208
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MPSFLDDMVNRNNIGRGRTRLRPPRTGRPSAGRVPLSTSRGPLGLNARPSQHYITKSSHK
TRSLPWQHDLFEDSLRAAGISGVEVGTKLYVSNLDPGVTNEDIKELFSEIGELKRYSVHY
DKNGRSSGSAEVVYLRRSDAFAALKRYNNVLLDGKPMIIEIVGANAEVPVSARVNVTGTR
GRQKRTVVMAPGAGQSRSAAGINRGLNRRGGMGMRNVRGGGGRGRGRGRGRGKRKPVEKS
ADDLDKELENYHAEAMNVS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcctagctttctggatgatatggtaaatcgaaataatatcgggagaggcagaacccgc
cttaggccgccgcgcaccggaagaccttctgctggaagagtgcctctctctactagtcga
ggccccctcggtcttaatgcccgcccatcccagcattacattactaagtcttcccacaaa
acaaggagcttgccctggcaacatgatttgtttgaagacagccttagagccgcagggata
tctggtgtagaagttggcaccaagctatatgtttccaacttggatcctggggtcacaaat
gaagatatcaaggaacttttctctgagatcggagagctgaaaagatactctgtacattat
gataaaaatggtcgttcaagtggttcagctgaagttgtctatcttaggaggagtgacgca
tttgctgctcttaagaggtacaacaatgtactgttggatggaaaacccatgataattgaa
attgttggtgccaatgcagaagtccctgtttcagctcgcgttaatgtaactggaacaagg
ggaaggcagaagaggaccgttgttatggcgcctggagcaggtcaatcgagaagcgctgct
ggaattaatcgtggtcttaatcgtcgggggggcatgggtatgaggaatgtccgtggtgga
ggtggtcgtggtagaggccgaggccgaggccgtggaaaaagaaagcctgtagagaaatcg
gcagatgatcttgacaaggagcttgagaactatcatgctgaagccatgaatgtttcctga
DBGET
integrated database retrieval system
