Hibiscus syriacus (Rose-of-Sharon): 120145801
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Entry
120145801 CDS
T09559
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
KO
K11088
small nuclear ribonucleoprotein D3
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120145801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120145801
03041 Spliceosome [BR:
hsyr03041
]
120145801
03032 DNA replication proteins [BR:
hsyr03032
]
120145801
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
120145801
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
Sm proteins
120145801
U2 snRNP components
120145801
Complex B
U1 snRNP components
120145801
U4/U6.U5 tri-snRNP components
120145801
Complex C
U2 snRNP components
120145801
DNA replication proteins [BR:
hsyr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
120145801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
120145801
NCBI-ProteinID:
XP_039015455
LinkDB
All DBs
Position
Unknown
AA seq
131 aa
AA seq
DB search
MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLENITFTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKSSSLGVGRGRAVAMRAKAQAAGRGT
TGRGVVPSIRR
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggagtttgggcataccggtgaagctattacacgaggcgtcgggtcacatcgta
acggtggaactcaagagtggagagctttacagaggaagcatggtcgagtgcgaggataat
tggaattgccagcttgagaacatcaccttcactgctaaagatggaaaggtttcacagctt
gagcatgttttcatccgaggcagtaaagtcaggttcatggtcataccggatatgttaaag
aatgctcctatgttcaaacgtctagatgctaaaatcaagggtaagagctcatctcttgga
gttggcagaggtagagctgttgcaatgcgagccaaagctcaagctgctggccgtggcaca
actggcagaggtgttgtgccatctattcgtaggtaa
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integrated database retrieval system
