Hibiscus syriacus (Rose-of-Sharon): 120146139
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Entry
120146139 CDS
T09559
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120146139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120146139
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120146139
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
WDR55
CFAP251_N
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_Vps41
WD40_Gbeta
EIF3I
Motif
Other DBs
NCBI-GeneID:
120146139
NCBI-ProteinID:
XP_039015727
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MGSSNIRDILTAFSPSLDYFAFSSGDGPIKLTWDTLKVQIQTEFADIVSSEATSINAKSE
RGYRSIDYKCMKWLSFDKKKKRKLGSSLLVLGTGSGDVLALDVSAGQLKWKFSGCHPGGV
SAIAFATNASCIYSAGVDGMVCEIDSLMRNLLRKFRASTKSISCLTVSPDGKALVTAAAQ
LKTFDCSNHKKIQKFTGHPVSVRCLIFTEDGKFILSSAAAERYIAVWKAEGRKKQSAICV
LAMEHPAVFIDSKCVNEEIYVSAISETGVCYFWYGQDIETLRNAKPTKLSISLEDGLSKP
HKGALPTIFAAKLQGVAKLASVHAFLAHGFLVKPLFQKIVVQCGSDILLSSSQDGVLLPR
SQPLNKSKKGLNTLNRVIALFRANVEDVTLPIPKIFNLHEGKVDRRRSLRVDTNDVMTDS
IDPRSQPEFVDGKDDD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggatcatcgaacatcagagatatattgactgcatttagtccttctctggactacttt
gcttttagttctggagatggtcctattaagctaacttgggacactttgaaggttcaaatt
caaactgaatttgcagacattgtatcaagtgaagcaacaagcataaatgctaagtcagaa
agagggtatcgttcaatagattacaaatgtatgaagtggttgtcttttgacaaaaagaag
aaaaggaaacttggaagttctttgctcgtattgggaactggaagtggagatgtcttagcc
cttgatgtgtcggctggtcagctgaagtggaaatttagtggttgccatcccgggggtgtc
agtgccattgcatttgctacgaatgcctcttgcatttatagtgctggggttgatgggatg
gtttgtgaaattgattcattgatgagaaatctattgcggaagttcagagcttctactaag
tctatatcttgtttgactgtctcaccagatggaaaggcattagttactgcagctgcacag
ttgaagacttttgattgttctaatcacaaaaagatacagaagtttactggacatccggta
tctgttcggtgcttgatatttactgaagatggaaaatttatcctatcatctgctgctgct
gaaagatatattgctgtatggaaagcagaaggcagaaaaaagcagtccgctatttgtgtt
ttggcaatggagcaccctgctgtctttatagatagcaaatgtgttaacgaggaaatctat
gtttctgcgatttcggaaactggtgtttgttacttttggtatggtcaggatattgagaca
ttgcgcaatgccaagcccaccaaactttcaatatctttagaagatggtttatctaaacct
cacaaaggtgcattgcctacaatatttgctgcaaaattgcaaggtgttgccaagctagca
tctgtacatgcgtttcttgcccatggttttctggtaaagccattgtttcagaaaattgtg
gtgcaatgtggctcggacatattattgagtagctcccaggatggggtccttttaccaagg
agtcaaccccttaacaaatcaaagaaagggcttaatacactgaatagagtaattgctttg
tttcgtgcaaatgtcgaggatgtcacacttccaatcccgaagatatttaatcttcatgag
ggaaaagtggatagacgtagaagtttgagagttgatactaacgatgtaatgactgattcc
attgaccctaggagccaaccggaattcgtggatggaaaagatgacgattaa
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