Hibiscus syriacus (Rose-of-Sharon): 120146618
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Entry
120146618 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80-like
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120146618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120146618
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
120146618
INO80 complex (yeast)
120146618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
PSY3
Motif
Other DBs
NCBI-GeneID:
120146618
NCBI-ProteinID:
XP_039016063
LinkDB
All DBs
Position
Unknown
AA seq
1451 aa
AA seq
DB search
MESRRQSKDSLSYTSLFNLESLMNFKVPQPDDDFDYYGNSSQDESRGSQGGALPNHGNGT
MSQKELSLAKRKWRGTFNSDEEDEDYQGTHITEERYRSMLGEHVQKYKRRFKDTSASPAP
SRMGIPTPKSNLGSSKTRKLGNEQRAGFYDMETTSEWMNDVSSQRFPNYHEAELVPKIMY
EPAYLDIGEGITYRIPPTYDKLASSLNLPSFSDIRVEEFYLKGTLDLRSLATMMASDKRF
GSQSRAGMGEPYPQYESLQARLKALEASNSTQTFSLKVSESALNSSIPEGAAGNLQRSIL
SEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKEPSVIEREEMDKLXKVWVTIVRRDI
PKHHRTFTNFHRKQLIDSKRFAENCQREVKLKVSRSLKFMRGAALRTRKLTRDMLLFWXR
VDKEMAEVRKREEREAAEALRREQEVREAKRQQQRLNFLIQQTELYSHFMQNKANSQPAE
VLPAKDEESNDDEKEDDGGPGGEEDPEEAELKKEALRAAQDAVSKQKKLTSAFDTECFKL
RQAAETEVPLEDSSVAGSSNIDLHNPSTMPVTSTVQTPEMFKGSLKEYQLKGLQWLVNCY
EQGLNGILADEMGLGKTIQAMVFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDL
KTLPYWGGLQDRMVLRKNINPKRLYRRDAGFHILITSYQLLVSDEKYFRRVKWQYMVLDE
AQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWF
SKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEIMVHCKLSSRQQA
FYQAIKNKISLAELFDGNRGYLNEKKILNLMNIVIQLRKVCNHPELFERNEGSTYFYFGE
IPNSLLPPPFGELEDIHYAGSHNPITYKIPKLLQQEVLHNSETLCSTVARGVYREMFYKY
FNVFSTANIHQSIFPQESSSNGLCVRSGTFGFSRLMDLSPAEVAFLGTGSFIERLLFSIS
RWDNQVLDGSLDDLMEVLDDDFNSSYLEMGTVRAVTRMLLMPSRSKTNSLRRRFATVPGN
DPFEALVVSHQDRLLSNTKLLHSTHTFIPRTRSPLIGAQCSDRNFAYRMTEELHNPWVKR
LLIGFARTSEYNGPRMPDGPHRLIQEIDSQLPVARPALQLTYKIFGSCPPMQXFDHAKLL
TDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRR
DMVRDFQLRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTR
DVTVYRLICKETVEXKILQRASQKXTVQQLVMTGGHVQGDLLAPEDVVSLLLDDAQLEQK
LREIPLQAKDRQKKQSTKGIRLDAEGDASLEDLANTGAQGTGADPSPDPEKGKSSNKKRK
SALLSKGIVAL
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggaatctaggcgccaatcgaaggattcgttgtcctacaccagtctcttcaatcttgag
tctttgatgaacttcaaagttccacaacctgatgatgattttgattattacgggaatagt
agtcaggatgagagcagaggtagccaaggtggagcactgccgaaccatggtaatggaact
atgtctcagaaggaattgagtttggcgaagcgaaagtggagggggactttcaatagtgac
gaggaggacgaggattatcaaggaactcatattactgaggagcgatatcgatcaatgctt
ggggagcatgtacagaagtataaaaggaggttcaaggatacctctgcgagtcctgctcct
tctcgaatgggcattccaactccaaagagcaatttgggtagttcaaaaactaggaaattg
ggaaatgaacagcgagcagggttctatgatatggagaccacatctgaatggatgaatgat
gttagttctcagaggtttccaaattatcacgaagcagagcttgtacccaaaatcatgtat
gaacctgcttatttagatattggagagggcatcacttataggattcccccaacctatgat
aagctggcatcgtcactgaacttgccaagcttttcagatatccgggtggaggagttttac
ctaaagggtactttagatttgaggtccttagcaacaatgatggctagtgataaaagattt
ggatcccaaagccgagcagggatgggagagccatatcctcaatatgaatcacttcaggca
agattgaaggctttggaagcttcgaactcaactcagacgtttagtctcaaggtatctgag
agtgcattgaattcctccattcctgagggggctgctggaaatttacaacggtctattttg
tcagagggtggtgtattacaggtttactatgttaaggttttggagaaaggagacacatat
gagataattgaacgaagcttaccaaagaaacctaaagtgaagaaagaaccttctgtaatt
gagagggaggaaatggataaattgngaaaagtttgggttaccattgttagaagagacatt
ccaaagcatcataggactttcactaattttcatcgaaagcaactcattgattcaaagaga
tttgctgaaaactgccagagagaggtgaaattaaaggtgagtagatctctcaaatttatg
aggggtgctgcacttcgcacaaggaaattgactagagatatgctgttgttctggnnaagg
gttgacaaggagatggcagaagtgaggaaaagggaggaaagagaagctgcagaagcttta
aggcgtgaacaagaggttcgagaagcgaagaggcagcagcaaaggctcaattttcttata
caacaaacagaactttatagtcactttatgcagaacaaggcaaattctcagcctgctgaa
gttttgcctgcaaaggatgaagaatcaaatgatgatgaaaaagaagatgatggtgggcct
ggcggtgaagaagatccagaggaggctgagctgaaaaaggaggctctaagagctgctcaa
gatgctgtatctaaacaaaaaaagctgactagtgcttttgatactgaatgtttcaagttg
cgtcaagctgctgaaactgaggtgcctttagaagatagttctgttgccgggtccagcaat
atagatctgcataacccttccactatgcctgtcacctcaacggttcagacacctgaaatg
tttaagggttccctgaaggaataccagttaaaggggcttcaatggcttgttaattgttat
gagcagggtttaaatggtattcttgctgatgaaatgggcttggggaaaactattcaggca
atggtgttcttggctcatttagctgaggagaaaaatatatgggggccttttcttgttgtt
gcacctgcttctgtcttgaataattgggctgacgagattagtcgcttctgtcctgacctt
aaaactcttccatattggggtggacttcaggatcggatggttcttaggaagaacatcaat
ccaaagcgactttatcgaagggacgctggatttcatattctgattactagctatcaactg
ctggtgtctgatgaaaagtattttcgacgagtgaaatggcaatacatggtattagatgaa
gcacaggcaatcaagagttcaagcagtataaggtggaagacactgcttagtttcaactgt
cgtaaccgcttgcttctgactggtacaccgatccagaataacatggcagaactatgggct
cttctgcatttcatcatgccaaccttatttgacagccatgaacagtttaatgaatggttt
tctaagggaattgagaatcatgctgaacatggaggtactttgaatgagcatcagcttaat
agattgcatgcaattttaaagccctttatgctgcggcgagttaagaaagatgtgatttct
gagctgactacgaaaacagagattatggttcactgcaagttgagttcccggcagcaagct
ttctatcaagctattaagaataagatatctctagctgaattgtttgatggcaatcgtgga
tatcttaatgaaaagaaaattctgaatttgatgaatattgtaattcagctgaggaaggtg
tgtaaccatccagagttatttgaaagaaatgaaggaagcacatacttctattttggagag
atcccaaattctcttctgcctcctccctttggtgagttggaggatatacactatgccgga
agtcataatcccataacctacaagatacctaaacttctccaacaagaggttctacataat
tctgaaacattatgctcgacagttgctcgtggagtttaccgagaaatgttttacaaatac
ttcaatgtattctccacggcaaatattcatcaatctattttcccacaagagagtagctca
aatggcttgtgtgtcagaagtgggacatttgggttctcccgtctgatggatttgtctcca
gcagaagttgcattcttaggaactggttcttttatcgagagactcttgttttctatttca
agatgggacaatcaggttttagatggaagtttagatgatttaatggaggtattggatgat
gacttcaattccagttaccttgagatgggaacggttagagctgtgacaaggatgttgtta
atgccatctagatccaagaccaactcgctcagaagaagatttgcaactgttccaggaaat
gatccatttgaggctttagttgtctctcatcaggataggctgctatccaatactaaactt
cttcattcaacacacacattcatcccacgaactagatctcctctgattggtgctcaatgc
tcggatagaaattttgcttacagaatgactgaagaactgcataatccatgggtcaaaaga
ttattgattgggtttgctcgaacgtctgaatataatgggcctagaatgccagatggtcct
catcgtttgattcaagaaattgattctcagttaccagttgcacgacctgccctccagctt
acatataagatatttggttcttgtcctcccatgcaangttttgaccatgcaaagttgcta
acagattctggcaagcttcagacgcttgatatattgttaaaacgtctccgagcagaaaat
caccgtgttctattgtttgcacaaatgacaaaaatgttgaatattttggaggactacatg
aactatagaaaatataggtacttgaggcttgatgggtcttccacgattatggatcgacga
gacatggtcagagactttcagctgcggaatgacatttttgtcttcttgctgagtaccaga
gctggtggattgggtattaacttgacagctgctgacactgtaatcttttatgaaagtgac
tggaatccaaccttggatttgcaagccatggacagagctcaccgtttagggcagacaagg
gatgttactgtctaccgactcatttgtaaggagacagttgagnggaagattttgcagaga
gcaagtcagaaanatactgtgcagcagcttgtcatgacaggtggccatgtgcagggagat
ctcttggctcctgaggatgttgtatctttacttctggatgatgcgcaactggagcagaaa
ttaagagaaattcctcttcaggctaaggatagacaaaaaaaacaatcaacgaagggcata
cggttagatgcggaaggtgatgcatctttggaagacttggcaaatactggagctcagggt
actggggctgatccatctccagatccagaaaaaggcaaatccagtaataagaagaggaaa
agtgctttgctaagcaaaggaattgtagccttgtag
DBGET
integrated database retrieval system
