Hibiscus syriacus (Rose-of-Sharon): 120147088
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Entry
120147088 CDS
T09559
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04142
Lysosome
hsyr04144
Endocytosis
hsyr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120147088
04142 Lysosome
120147088
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120147088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120147088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120147088
Membrane trafficking [BR:
hsyr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120147088
Exosome [BR:
hsyr04147
]
Exosomal proteins
Proteins found in most exosomes
120147088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
Motif
Other DBs
NCBI-GeneID:
120147088
NCBI-ProteinID:
XP_039016474
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MFERTANLVNNQIINYKCDPSEKWLVLIGISPGAPERPQLVKGNMQLFSVNQQRSQALEA
HAASFAQFKVPGNENPSILISFATKSFNAGQIVSKLHIIELGAQPGRPSFSKKQADLFFP
PDFQDDFPVAMQISHIYSLIYVITKLGLLFVYDLETASAVYRNRISPDPIFLTSEASAAG
GFYAINRRGQLNNLELAVNLAKRGNLPGAENLSVPVQAGQTPPLLQYFGTLLTKGKLNAF
ESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYVKARATPKVVA
AFAERREFDKILIYSKQVGYSPDYLFLLQTFFVQIHRQRGYNLFYLQGAVNFALMMSQME
GGCPVDYNTITDLFFRSDRNLIREATAFFRCFEAKSARACFYRQRLFLDMLVLEINLVTF
PNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAIEPQALV
EFFGTLSREWALECMKDLLLVNLRGNLQIVQEVERVTRESNFYDAEKTKNFLMEAKLPDA
RPLINVCDRFGFVPDLTHYLYTNNMIRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKG
LILSVRSLLPVDPLWMNARREHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDEL
IDVTNKNSLFKLQARYVVERMDADLWDKVLNPENEYRRHLIDQVVSTALPESKSPEQVSA
AVKAFMTADLPHELIELLEKIVLQKLCIQWELQSAKSTYLTAIKADPSRAVDVLLDNIRS
IDRAVEFAFRVEDAVWSQVAKAQLREGLVSDAIESFIRADDATHFFEVIRASEDANVYPD
LVRYLLMVREKVKEPKVDSELIYAYAKIDRLGEIEEFILMPNVANLQMLGAVDAARKANS
AKTWKEVCFACGLEEVSEYYQNRGCFNELISLMESGLGLERAHMVQRYSSKLLVLSYYKA
VHFYLQEHPDLINDMLNVLALRVDHTRVVDIMRKAGHLCLVKPYMVAVQSNNVSAVNEAL
NDIYVEEEDYDRLRESIDLHDNFDQMDLHKRQVDGSSPLPCQRRTNIRDAMETASQSGER
ELAEELLVYFIDQGKKECFTSCLFVCYDLIRPDVLELAWINNMIDFAFPYLLQFIREYTC
KVDELIKDKIEAQKKYVAQLLPLALPAPPMPGMGGPTMGGGFAPPHHPWEEWEWEWNASM
PPYGMPPMGSSY
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagagaacagctaatttagtcaacaatcagataataaactataaatgtgaccct
tcggagaagtggttggttttgattggaatttcccctggtgcacctgagaggccacaattg
gtcaaggggaacatgcaacttttctctgttaatcagcagcgtagtcaagctcttgaagca
catgctgcttcttttgcacaatttaaggttccaggaaacgagaatccttccattcttatt
tcttttgctaccaagagttttaatgctggccagattgtgtcaaagttgcacataattgag
cttggtgctcagccaggtaggccatcattttcaaagaaacaggcagatctattcttccca
ccagattttcaagatgattttccagttgcaatgcagatatcacacatatatagtttaatc
tatgttatcaccaagctggggctgctgtttgtttatgatctagagacagcaagtgccgta
tacagaaatagaatcagcccagacccaatatttttaacctctgaagcttcagcggcagga
gggttttatgccatcaacaggcgaggtcagctgaacaatttggagcttgctgtcaatctg
gctaaaagaggaaaccttcccggtgcagagaacctgagtgtacctgtgcaagctgggcag
actccaccattgttgcagtattttggtacacttttaacaaaagggaagcttaatgcattt
gagtcattggaattatctcgactagtggtaaaccaaaacaagaagaatcttctggagaat
tggctggctgaagataaattggaatgtagtgaggaacttggtgaccttgtgaagactgtg
gataatgatcttgcactgaaaatatatgttaaagctagggcaactcctaaagttgttgca
gcttttgcagaacgaagggagtttgacaaaatcttgatatactcaaagcaggttgggtac
tctcctgactatctgttccttctgcaaacattcttcgtacagatccacagacaaaggggt
tataacttgttttacttgcagggagctgttaattttgcattgatgatgtctcaaatggag
ggaggctgtccggttgattacaacactattactgaccttttcttcaggtctgataggaac
ttgatacgagaggctactgcattttttagatgttttgaagccaaatctgccagagcatgc
ttttacagacaaaggttatttcttgatatgctggttttggaaatcaatttagtgactttt
cctaatgttgccgatgccattttagcaaatggaatgttcagtcattatgatcgccctcga
attgcacaactttgtgagaaagctggtctctatgtgcgagctctgcagcattactctgag
ttgccagatattaaacgtgtcatcgtgaatacacatgctattgagccacaggcacttgtt
gaatttttcggcactctttcacgagaatgggctttggagtgcatgaaggaccttctgctg
gttaatctaaggggaaaccttcaaatcgttcaggaggttgagcgcgtaaccagggaatca
aacttttatgatgctgaaaagacaaagaacttcctgatggaagccaagcttcctgatgcc
agacccttgattaatgtttgtgatcgatttgggtttgtccctgatctcactcactacctc
tacacaaacaacatgatccgttacattgaaggttatgttcagaaggtgaaccctgggaat
gctcctttggtagtgggacagttactagacgatgaatgccctgaagattttattaaaggt
ctcattctctcagtacgttctttgctaccagttgatcccttgtggatgaatgcgagaaga
gagcacttcctcacaaccaacccttactatgattcccgggtcgttggtaagtactgtgag
aaacgtgatcccaccttggcagttgtggcttaccgaagaggacaatgtgatgacgaactt
atcgatgtcacaaataagaactcgttgttcaaattgcaggccaggtatgttgtagagagg
atggatgctgatctttgggacaaggttctaaatcctgaaaatgaatatagaagacatcta
attgatcaggttgtgtcgactgctttgccagagagcaaaagtccagaacaagtgtctgct
gctgttaaagccttcatgactgctgacttgccccatgaactgattgagcttcttgagaag
atagtgctccaaaaactctgcattcagtgggaacttcaatctgcaaaatctacttatttg
acagctatcaaggcagatccatccagagctgtcgatgttttattggataacattagaagt
attgatcgagccgtggaatttgctttccgagttgaagatgctgtttggagtcaggtggca
aaggcacaactaagggaaggtctggtgagcgatgcaattgagtcatttattcgtgcagat
gatgctactcacttctttgaggttatccgagcttctgaggatgctaatgtctaccctgat
ctggtgaggtaccttctgatggtcagggagaaggtcaaggagcccaaggtggacagtgaa
ctcatatatgcatatgcaaagattgatagactgggtgaaattgaagaattcattctcatg
ccaaatgtggctaatcttcaaatgttgggtgctgttgatgcagcacggaaagcaaacagt
gccaagacatggaaggaagtttgctttgcttgtggattggaagaagtcagtgaatactat
cagaatagaggatgcttcaatgagttaatctctctcatggagagtggtttaggattggaa
cgtgcacatatggttcaaagatattcgtcaaagttgctagtgttgagctattacaaggct
gtccacttctacttgcaagaacatcctgatctcatcaatgatatgctcaatgtgctggct
cttcgtgtggatcacactcgtgttgttgatatcatgagaaaggctggccatctatgcctt
gtgaagccatacatggttgctgttcagagcaacaatgtgtcggcagtaaatgaggcattg
aatgatatttatgttgaggaagaagattacgatagattgagagaatctattgatttgcat
gataattttgatcagatggacttgcacaaaaggcaggtagatggaagcagtccattgcct
tgtcaaagaaggacaaacattcgagatgcaatggaaacagcttcacagtctggtgaacgt
gaacttgccgaggagttgcttgtttatttcattgatcagggcaagaaggaatgcttcaca
tcgtgcctctttgtctgttatgacttaattcgaccagatgttcttgagcttgcctggatt
aacaacatgatcgacttcgcattcccgtatctgctgcagtttatccgcgaatatacttgc
aaagttgatgaacttatcaaggacaagattgaagctcaaaagaaatatgttgctcagctg
ctacctcttgcattgcccgcaccgccaatgccaggtatgggaggaccaacgatgggtggt
ggatttgcacctccccaccacccatgggaggaatgggaatgggaatggaatgcctcgatg
ccaccttacgggatgccgccaatgggaagcagttattaa
DBGET
integrated database retrieval system