KEGG   Hibiscus syriacus (Rose-of-Sharon): 120147088
Entry
120147088         CDS       T09559                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04142  Lysosome
hsyr04144  Endocytosis
hsyr05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120147088
   04142 Lysosome
    120147088
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    120147088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsyr04131]
    120147088
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsyr04147]
    120147088
Membrane trafficking [BR:hsyr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    120147088
Exosome [BR:hsyr04147]
 Exosomal proteins
  Proteins found in most exosomes
   120147088
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_PEP5_VPS11
Other DBs
NCBI-GeneID: 120147088
NCBI-ProteinID: XP_039016474
LinkDB
Position
Unknown
AA seq 1212 aa
MFERTANLVNNQIINYKCDPSEKWLVLIGISPGAPERPQLVKGNMQLFSVNQQRSQALEA
HAASFAQFKVPGNENPSILISFATKSFNAGQIVSKLHIIELGAQPGRPSFSKKQADLFFP
PDFQDDFPVAMQISHIYSLIYVITKLGLLFVYDLETASAVYRNRISPDPIFLTSEASAAG
GFYAINRRGQLNNLELAVNLAKRGNLPGAENLSVPVQAGQTPPLLQYFGTLLTKGKLNAF
ESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYVKARATPKVVA
AFAERREFDKILIYSKQVGYSPDYLFLLQTFFVQIHRQRGYNLFYLQGAVNFALMMSQME
GGCPVDYNTITDLFFRSDRNLIREATAFFRCFEAKSARACFYRQRLFLDMLVLEINLVTF
PNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAIEPQALV
EFFGTLSREWALECMKDLLLVNLRGNLQIVQEVERVTRESNFYDAEKTKNFLMEAKLPDA
RPLINVCDRFGFVPDLTHYLYTNNMIRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKG
LILSVRSLLPVDPLWMNARREHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDEL
IDVTNKNSLFKLQARYVVERMDADLWDKVLNPENEYRRHLIDQVVSTALPESKSPEQVSA
AVKAFMTADLPHELIELLEKIVLQKLCIQWELQSAKSTYLTAIKADPSRAVDVLLDNIRS
IDRAVEFAFRVEDAVWSQVAKAQLREGLVSDAIESFIRADDATHFFEVIRASEDANVYPD
LVRYLLMVREKVKEPKVDSELIYAYAKIDRLGEIEEFILMPNVANLQMLGAVDAARKANS
AKTWKEVCFACGLEEVSEYYQNRGCFNELISLMESGLGLERAHMVQRYSSKLLVLSYYKA
VHFYLQEHPDLINDMLNVLALRVDHTRVVDIMRKAGHLCLVKPYMVAVQSNNVSAVNEAL
NDIYVEEEDYDRLRESIDLHDNFDQMDLHKRQVDGSSPLPCQRRTNIRDAMETASQSGER
ELAEELLVYFIDQGKKECFTSCLFVCYDLIRPDVLELAWINNMIDFAFPYLLQFIREYTC
KVDELIKDKIEAQKKYVAQLLPLALPAPPMPGMGGPTMGGGFAPPHHPWEEWEWEWNASM
PPYGMPPMGSSY
NT seq 3639 nt   +upstreamnt  +downstreamnt
atgtttgagagaacagctaatttagtcaacaatcagataataaactataaatgtgaccct
tcggagaagtggttggttttgattggaatttcccctggtgcacctgagaggccacaattg
gtcaaggggaacatgcaacttttctctgttaatcagcagcgtagtcaagctcttgaagca
catgctgcttcttttgcacaatttaaggttccaggaaacgagaatccttccattcttatt
tcttttgctaccaagagttttaatgctggccagattgtgtcaaagttgcacataattgag
cttggtgctcagccaggtaggccatcattttcaaagaaacaggcagatctattcttccca
ccagattttcaagatgattttccagttgcaatgcagatatcacacatatatagtttaatc
tatgttatcaccaagctggggctgctgtttgtttatgatctagagacagcaagtgccgta
tacagaaatagaatcagcccagacccaatatttttaacctctgaagcttcagcggcagga
gggttttatgccatcaacaggcgaggtcagctgaacaatttggagcttgctgtcaatctg
gctaaaagaggaaaccttcccggtgcagagaacctgagtgtacctgtgcaagctgggcag
actccaccattgttgcagtattttggtacacttttaacaaaagggaagcttaatgcattt
gagtcattggaattatctcgactagtggtaaaccaaaacaagaagaatcttctggagaat
tggctggctgaagataaattggaatgtagtgaggaacttggtgaccttgtgaagactgtg
gataatgatcttgcactgaaaatatatgttaaagctagggcaactcctaaagttgttgca
gcttttgcagaacgaagggagtttgacaaaatcttgatatactcaaagcaggttgggtac
tctcctgactatctgttccttctgcaaacattcttcgtacagatccacagacaaaggggt
tataacttgttttacttgcagggagctgttaattttgcattgatgatgtctcaaatggag
ggaggctgtccggttgattacaacactattactgaccttttcttcaggtctgataggaac
ttgatacgagaggctactgcattttttagatgttttgaagccaaatctgccagagcatgc
ttttacagacaaaggttatttcttgatatgctggttttggaaatcaatttagtgactttt
cctaatgttgccgatgccattttagcaaatggaatgttcagtcattatgatcgccctcga
attgcacaactttgtgagaaagctggtctctatgtgcgagctctgcagcattactctgag
ttgccagatattaaacgtgtcatcgtgaatacacatgctattgagccacaggcacttgtt
gaatttttcggcactctttcacgagaatgggctttggagtgcatgaaggaccttctgctg
gttaatctaaggggaaaccttcaaatcgttcaggaggttgagcgcgtaaccagggaatca
aacttttatgatgctgaaaagacaaagaacttcctgatggaagccaagcttcctgatgcc
agacccttgattaatgtttgtgatcgatttgggtttgtccctgatctcactcactacctc
tacacaaacaacatgatccgttacattgaaggttatgttcagaaggtgaaccctgggaat
gctcctttggtagtgggacagttactagacgatgaatgccctgaagattttattaaaggt
ctcattctctcagtacgttctttgctaccagttgatcccttgtggatgaatgcgagaaga
gagcacttcctcacaaccaacccttactatgattcccgggtcgttggtaagtactgtgag
aaacgtgatcccaccttggcagttgtggcttaccgaagaggacaatgtgatgacgaactt
atcgatgtcacaaataagaactcgttgttcaaattgcaggccaggtatgttgtagagagg
atggatgctgatctttgggacaaggttctaaatcctgaaaatgaatatagaagacatcta
attgatcaggttgtgtcgactgctttgccagagagcaaaagtccagaacaagtgtctgct
gctgttaaagccttcatgactgctgacttgccccatgaactgattgagcttcttgagaag
atagtgctccaaaaactctgcattcagtgggaacttcaatctgcaaaatctacttatttg
acagctatcaaggcagatccatccagagctgtcgatgttttattggataacattagaagt
attgatcgagccgtggaatttgctttccgagttgaagatgctgtttggagtcaggtggca
aaggcacaactaagggaaggtctggtgagcgatgcaattgagtcatttattcgtgcagat
gatgctactcacttctttgaggttatccgagcttctgaggatgctaatgtctaccctgat
ctggtgaggtaccttctgatggtcagggagaaggtcaaggagcccaaggtggacagtgaa
ctcatatatgcatatgcaaagattgatagactgggtgaaattgaagaattcattctcatg
ccaaatgtggctaatcttcaaatgttgggtgctgttgatgcagcacggaaagcaaacagt
gccaagacatggaaggaagtttgctttgcttgtggattggaagaagtcagtgaatactat
cagaatagaggatgcttcaatgagttaatctctctcatggagagtggtttaggattggaa
cgtgcacatatggttcaaagatattcgtcaaagttgctagtgttgagctattacaaggct
gtccacttctacttgcaagaacatcctgatctcatcaatgatatgctcaatgtgctggct
cttcgtgtggatcacactcgtgttgttgatatcatgagaaaggctggccatctatgcctt
gtgaagccatacatggttgctgttcagagcaacaatgtgtcggcagtaaatgaggcattg
aatgatatttatgttgaggaagaagattacgatagattgagagaatctattgatttgcat
gataattttgatcagatggacttgcacaaaaggcaggtagatggaagcagtccattgcct
tgtcaaagaaggacaaacattcgagatgcaatggaaacagcttcacagtctggtgaacgt
gaacttgccgaggagttgcttgtttatttcattgatcagggcaagaaggaatgcttcaca
tcgtgcctctttgtctgttatgacttaattcgaccagatgttcttgagcttgcctggatt
aacaacatgatcgacttcgcattcccgtatctgctgcagtttatccgcgaatatacttgc
aaagttgatgaacttatcaaggacaagattgaagctcaaaagaaatatgttgctcagctg
ctacctcttgcattgcccgcaccgccaatgccaggtatgggaggaccaacgatgggtggt
ggatttgcacctccccaccacccatgggaggaatgggaatgggaatggaatgcctcgatg
ccaccttacgggatgccgccaatgggaagcagttattaa

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