Hibiscus syriacus (Rose-of-Sharon): 120147174
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Entry
120147174 CDS
T09559
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120147174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120147174
Spliceosome [BR:
hsyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120147174
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
CDC45
Motif
Other DBs
NCBI-GeneID:
120147174
NCBI-ProteinID:
XP_039016541
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All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MDKDKHASKRSRDRDGRHHRDSDRHHNDRDSHRRSDHRSSTSRRDERERSFEREGSRDRK
HREGSYEEFEARKKRKEREESEERGEKRSKLGEENRKEKRERRRFGDKAKEDDEIELFNG
ASGGDPVHNIFFLVLSLGCWVLQFLSAGVIVVTFLHLLLIQGCCSGIITEDWSPPSYQDG
SSSIGKSGANFSLDALAKAKKALQMQKELAEKMKKIPILNRGPNSSSVVATGTVQRPASS
VTTANATGPSSSSAEPATAPVVSSKPPTTGVAAVPGLASIPNLEAVKRAQELAAEMGFRQ
FAPLINMFPGQVQVDVPVAQKPTKAPVLRVDALGREIDEHGNIINVTKPSNLSTLKVNIN
KQKKDAFQILKPELEVDPESNPHFDERMGINKNKLLRPKRMSFQFVEEGKWSKDAEIIKL
KSQFGEAKAKELKAKQAQLAKAKADINPNLIEVSERIITKEKPKDPIPEIEWWDLPLLVS
GSYDDIADGVLSVDKLKEKKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRR
LAREKDKQEMIRQGLIEPPKPKVKLSNLMKVLGSEATQDPTKLEMEIRSAAAEREQAHVD
RNIARKLTPAERREKKERKLFDDPNTVETIVSVYRVNDLSHPKTRFKVDVNAQENRLTGC
AVISEGISVVVVEGGSKSIKRYGKLMLRRINWAEAVNETGDRDEDDDEEKPPNKCVLVWQ
GSVAKSSFNRFSVHECITEAAARKVFSDAGVGHYWDLVVNFSENDF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagataaacacgcatccaaacgatcccgagaccgcgacggcaggcaccaccgt
gactccgatcgtcaccacaacgaccgcgattctcatcgccggtcggatcatagatcttcc
acatcgcgccgtgacgagcgcgagagatctttcgagagggaaggttcgagagataggaaa
catcgtgagggttcctacgaggaattcgaagcaaggaagaagaggaaagagagggaggag
agtgaggagagaggggagaagaggagtaaactgggagaagaaaacagaaaggaaaagaga
gagaggaggagatttggggataaggctaaagaagatgatgaaatcgagttattcaatggc
gccagtggtggtgatccagttcacaatatttttttcctagttctttctttgggctgctgg
gttcttcagtttttgtctgcaggagtcatagttgttaccttcttacatttactgctaatt
caaggatgctgctcaggcatcattaccgaagactggtcacccccttcctaccaagatggc
tcttcatctattgggaaaagtggtgcaaacttctctcttgatgccttagccaaagcaaaa
aaggctttacaaatgcagaaagaattagctgagaaaatgaagaagatacccatcttgaat
agaggccctaactcaagttcagtagtggcaaccggaacagttcagcgaccagcctcgtct
gtgactacagccaatgccactggaccatcaagctcatcagccgaacctgccactgcaccg
gtggtttcttcaaagccacccactactggtgtggctgctgttccgggccttgcatcaata
cccaatttagaagctgttaaacgtgctcaagagctggctgctgagatgggattccgccag
tttgctcctctaataaacatgtttcctggacaggtgcaagtagatgttccagttgctcag
aaacctactaaggcacctgttctacgagttgatgcactcggtagggaaattgacgaacat
ggtaatataataaacgtgactaaaccaagtaatcttagcaccctcaaggtcaacattaac
aagcaaaagaaagatgcattccagatacttaaacctgagctagaggtggatccggaatca
aatccacattttgatgagcggatgggaatcaataagaataagcttcttagaccaaaaagg
atgagttttcagttcgtagaggaaggaaaatggtcaaaagatgcggagatcatcaaattg
aagagtcaatttggagaagcaaaagcgaaagagcttaaagcaaagcaagcacaattggca
aaggcaaaggcggatataaatcccaatttaattgaggtgtcagaaagaattataacaaaa
gagaaaccaaaagacccgattcctgaaatagagtggtgggatttgcctcttcttgtctcg
ggttcctatgatgacatcgctgatggtgtgctgagtgtagataaactgaaggagaagaag
atcacgatttatgttgagcatcctcgcccaattgagcctcctgctgagccagctccacca
ccgcctcagcccctgaagctaaccaagaaggagcagaagaagcttcggactcagcgacgt
ttggcccgggaaaaggataaacaggagatgattagacaaggcctgatagaaccccccaaa
ccaaaagttaagttgagcaacttaatgaaagttttaggctctgaagcaactcaagatccc
actaaacttgaaatggaaatccgaagtgctgctgctgagcgggaacaggctcacgtagac
agaaacattgctcgcaagcttacccctgctgaacgccgtgaaaagaaagagagaaagctt
tttgacgacccgaatacagtggaaacaatcgtttcagtttaccgggtcaatgatctctca
catcccaagacccgcttcaaagttgatgttaatgcccaagaaaaccgtttgactggttgt
gccgtgatctcggagggcattagtgttgtagttgtggaaggcggaagcaaatccattaag
aggtacgggaagcttatgcttcggcgaattaattgggctgaagctgtaaatgaaaccggt
gatagagacgaagatgacgacgaagagaaaccgcctaacaagtgtgtgttagtttggcaa
ggcagcgttgctaaatcaagtttcaacaggttctcggttcacgagtgcatcaccgaagca
gctgcgagaaaggtattttctgatgcgggcgtcggccattactgggaccttgtagttaat
ttctccgagaatgatttttga
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