KEGG   Hibiscus syriacus (Rose-of-Sharon): 120147502
Entry
120147502         CDS       T09559                                 
Name
(RefSeq) DNA repair protein UVH3-like
  KO
K10846  DNA excision repair protein ERCC-5
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    120147502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsyr03400]
    120147502
DNA repair and recombination proteins [BR:hsyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120147502
SSDB
Motif
Pfam: XPG_N XPG_I UBM
Other DBs
NCBI-GeneID: 120147502
NCBI-ProteinID: XP_039016794
LinkDB
Position
Unknown
AA seq 1684 aa
MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLLGFFR
RICKLLYLKTKPVFVFDGATPVLKRRTVISRRRQRENAQAKIRKTAEKLLLNQLKQMRLK
ELAKDLENQRKMQMNSNKGKMVSSDNCSDTNIVGYNANVELTKEYDVKLKEKLEVPSTAK
DGGHDDNEDEDEVIILHDIDGNIDPDVFAALPQSMQRQLLKQTDAKGKNILLNNPNQSNM
ERSSIEHDTAASISCNQEKLDEMLAASIAAQEDNNLANNSLASVAAIASEEDGDEDEEMI
LPAMHGNVDPTVLAALPPSLQLDLLSQMRERSMVENRQKYQKVKKAPEKFSELQIQSYLK
TVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLASARKERDENK
QQEIHSDHPSGSLNSVKSSCKSNMLTESVPDESTSARDEDVGTYLDERGRVRVSRVRGMG
IRMTRDLQRNLDLMKEIEQERTNLNKGVNLQSVPDKIKIDTSKSVSSGNHFAETSHDGNS
ESVNVNENQQSAFKTEACMEITFEDDGKNEYFDDDDDGIFARLAAGDPVTLPSPEEKSSR
KQALGSDSDFEWEEVVVEGTGDGVTLGMNAEKTLLNKEKNITDESEVEWEEEPSDASKSS
SVPVESGRMLSKGYLEEESDLQEAIRRSLADVGVEKSNYFPSEVVESKTLGENLDEGFGS
LHEKGNLGGPSFPGDNVNWQNKSCENLDRLQKLYTRNEPNISESLNSPKSPSPIHNSDKN
MTLLNKHSEKSDGSRSEQSRCNGSSELVATLERLNFPTGKHWDASKGVDRLPTIADIGFK
DSSHSLYAEHGELPGAILVDKKPGSEDGPSNLVSDKKSSVEAELFIMGQDKKDNIESKLL
KQSVETVGSSIPPVQSYANTVISDIHIEQESAGDITYKSCVNEAEQHKDMSTIKNNDSEE
IKFSETSLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPT
EAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTR
EKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLGKFREWIESPDPTILGKLNVQ
EGSSARKRGSKLTEKDVDSAKTSTGGSESSIGNQKTFQADKNKQSADCIDDIKQIFMEKH
RNVSKNWHIPSSFPSEAVISAYSSPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSD
ELLLPVLREYEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGIIGNQASELIDDGMQQG
SKSRKKRRVSPVQSGDKESGETSNMKKDISQCQSKSMEKSVPKTSRKRQLSGKDVSSQMS
TPEQQLQMSRRLKANKQSAGNERGRGCGEGRRRRKASHDFQQSETSSSGDDSGNDNREVD
EELDQPREVRRSKRTRNLVSYTVNDVEDEAEVNHKDSSGEDAMEEEADNGVKEKIQPEAR
EPFLANTDGVYLETGGGFCMDERGTDQPGENQDVDPSETEPTNDYQKMGGGFCTEERDDD
KPEASQHVDPFSETEPTNDYMKMGGGFCMEEKNIDQPDTSQAGDPISEGGLANDYLKMGC
GFCMEESDTTKDLDADYYQYPVQATEDGCKESAPLQETISSDVRATFIGGLSAMPSLKRK
RRKR
NT seq 5055 nt   +upstreamnt  +downstreamnt
atgggagttcacggtctctgggaactactggctcccgtcggccgccgcgtgtccgtcgaa
accctagccggaaagaaactcgccatcgatgcaagtatttggatggttcaattcatgaag
gcgatgcgagatgagaagggagaaatggttcggaacgcgcatttgttagggtttttcagg
agaatttgcaagcttttatatctaaaaactaagcctgttttcgtcttcgacggtgccaca
ccggttctcaagcgtcgcactgtcatttctcgccgtcgacagcgagaaaatgcccaggct
aagatccgaaaaaccgctgaaaaattgctcctcaatcaactaaagcaaatgagattgaaa
gagttggcaaaggatctcgagaaccagaggaaaatgcaaatgaatagtaataagggtaag
atggtttcttcggataactgctctgacactaacattgtgggatataatgccaatgtggaa
ttgacaaaagaatatgatgtaaagctgaaggaaaaattagaagtgcctagtactgcaaag
gatgggggtcacgatgacaatgaagatgaagatgaagtgataatactgcatgatattgat
ggaaatattgatcctgatgtttttgctgccttgccacaatcaatgcaacgccaacttctt
aagcagactgatgctaagggtaagaatattctattaaataacccgaatcaatctaacatg
gagaggagtagcatagaacacgacactgcggcttcaattagttgcaatcaggaaaagctg
gatgaaatgttggcagcgtctatcgcagcacaggaagataacaatttagctaataactca
ttagcatcagttgcagctatcgcttccgaggaggatggtgatgaagatgaagagatgata
cttcctgcaatgcatgggaatgttgatcccactgttttagctgctttgcctccatctctg
caacttgatcttcttagtcagatgcgagaaaggtcgatggttgaaaatagacaaaagtat
caaaaagttaaaaaggcacctgaaaagttctctgagctacaaatacaatcttatcttaaa
actgttgctttccgtcgagagatagatgaagttcagagagctgctgctgggagaggggtt
gcaggcgtacagacttccaggatagcctctgaagccaacagagaatttattttttcatcg
tcatttactggagacaaacaggttcttgcatctgctagaaaagagagagatgaaaataag
caacaagagatacattcagatcatccttcaggttctttgaatagtgttaaatcaagctgt
aagtctaatatgttaacagaatcggtccctgatgaatctactagtgctcgtgatgaagat
gttgggacatatcttgatgagagaggccgtgtacgtgtcagtagagtgagaggtatgggg
attcgtatgactcgtgacttacaaaggaacttagatttgatgaaagagattgagcaggaa
agaacaaatttgaataagggtgtaaatctgcagtctgtgccagataagattaaaattgac
acttcaaagagtgtatctagtggaaaccattttgcagaaacttcacatgatggtaactct
gaatctgtaaatgtgaatgagaaccagcagtctgcatttaaaactgaagcttgtatggaa
ataactttcgaagatgatggaaagaacgagtattttgatgatgacgatgatggtattttt
gcacggttagcagcaggggatcctgtgacactaccttctcctgaggaaaaatcttcgaga
aagcaggctttgggttctgattcagattttgagtgggaggaagttgtggttgaaggaact
ggggatggtgttactcttggtatgaatgctgaaaaaactcttttgaataaggaaaaaaat
attactgatgagagtgaagtggaatgggaggaagaaccttctgatgcttccaagagttcc
tctgtccctgttgaatcgggtagaatgctctctaaaggttatttggaagaggagtctgat
ctacaggaggcaataaggagaagtcttgcagatgtaggtgttgaaaaatctaattatttt
ccttctgaagttgttgaatcgaaaaccttgggagaaaacttggatgaaggttttggatct
ctgcatgaaaagggtaatctgggtggaccaagttttccaggggataatgttaattggcag
aataaatcttgtgaaaatttagatagactccagaagctgtataccaggaatgagccaaat
atatcagaaagcttaaattctcctaagagcccatcacctatacataattctgataaaaac
atgacactactgaataaacattctgaaaaatcggatggttctcgttctgaacaatcaagg
tgcaatggaagttcggaattagttgcaacattggaaaggctcaattttcctacagggaag
cactgggatgcttctaagggagttgacaggttgccaaccatcgctgacattgggtttaag
gatagttctcatagtttgtatgcagaacatggtgaacttcctggtgccattctggttgat
aagaaacctggttctgaagatggaccatctaacctggtcagtgataagaaaagtagtgtc
gaagctgaactgttcattatgggtcaagataagaaagataatattgaatctaaactattg
aagcaatcagttgagacagttggctcatccattcccccggtgcagtcttatgcaaataca
gtaatatctgatattcacattgagcaagaatcggcaggggatataacttacaaaagttgt
gtcaacgaagcagaacagcataaagacatgtctaccattaagaacaatgatagtgaagaa
attaagttctcggagactagtttggatgaggaactactaattctagatcaggaatgtatc
aatatggtagatgagcagaggaagcttgaacgtaatgcagaatctgtgagtagtgagatg
tttgcagagtgtcaggaactgctgcaaatgtttggcttaccctacattattgcaccaacg
gaggcagaagcccaatgtgcttatatggagcttacaaaccttgttgatggtgttgtcact
gatgattctgatgtattcttatttggagcacgaagtgtttacaagaatatatttgatgat
cgtaaatatgtggagacttacttcatgcaggacattgagaaggaacttggattgacaagg
gaaaagttaatgcgaatggcattgcttctggggagtgactacactgagggggttagtgga
attggtattgttaatgctattgaggtagtgaatgcattcccagaagaggatggacttggt
aaattccgggagtggattgaatccccagatcctactatattggggaagcttaatgtgcaa
gaaggatccagtgcaaggaagagaggttccaaattgaccgaaaaagatgtcgatagtgca
aaaactagcaccggaggctctgaaagcagcatcggaaatcagaaaacgtttcaagctgac
aagaacaagcagtctgcagattgcatcgatgacataaagcagattttcatggaaaaacat
aggaatgtgagcaaaaactggcatataccctcttcattcccaagtgaagcagttatttct
gcatattcttcgccacaagtggataagtcaactgagccattcacatggggaaggccagat
ctttttgtccttcgcaaactgtgctgggagaaatttggatggggtagtcagaaatcggac
gagttgcttctgcctgttttaagagaatacgaaaaacgtgagactcaattgcgaatggaa
gccttttacactttcaatgaaagatttgctaaaatccgtagcaagagaattaagaaagca
gttaaaggaatcattggaaaccaggcatcggagttaatagatgatggcatgcaacaaggt
tctaaaagtaggaaaaagagaagagttagcccagttcaaagtggagataaagaatcaggg
gagacttcaaacatgaaaaaggacatttctcaatgtcagagcaaatccatggagaaatca
gtgcccaagacatcaaggaaacggcagctctctgggaaggatgtttcatctcagatgagc
actccagaacaacaactgcagatgtcacggaggctaaaagccaacaaacaatcagctggg
aatgaaagaggtagaggttgcggtgaaggaagaagaaggcgtaaagcaagtcatgatttt
cagcagtctgaaaccagctcttctggtgatgatagtggcaatgataatcgggaagttgat
gaggagttagatcagccacgggaagtacgaaggtccaagcgaactcgaaaccttgtgagt
tacaccgtgaatgacgtggaagatgaggctgaagtgaaccataaagattcctctggtgaa
gatgcaatggaggaagaagcagataatggtgttaaagaaaagattcaacctgaagctaga
gagccttttcttgccaacaccgatggggtctatcttgaaacaggaggtggattctgcatg
gacgagaggggaactgatcaacctggtgaaaaccaagatgttgatccctctgaaactgaa
ccaactaatgattaccagaaaatgggaggcggattttgcactgaagaaagagacgatgat
aaacccgaggcaagccaacatgttgatcccttttctgaaaccgaaccgactaacgattac
atgaaaatgggaggtggattctgcatggaagaaaagaacattgatcaacctgatacaagt
caagctggtgatcccatttctgaaggcggactcgctaacgattacctgaaaatgggatgt
gggttttgcatggaagaaagtgatacaaccaaggatctagatgccgattactaccaatat
cctgtacaagcaaccgaagatggttgcaaggaaagtgcaccacttcaggagacaatctca
agtgatgtcagagcgacattcatcggcggtctaagtgcaatgccttccttgaagagaaaa
cgccggaagaggtga

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