Hibiscus syriacus (Rose-of-Sharon): 120147702
Help
Entry
120147702 CDS
T09559
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120147702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120147702
03009 Ribosome biogenesis [BR:
hsyr03009
]
120147702
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120147702
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 related factors
120147702
Complex B
120147702
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Helicases
120147702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
120147702
NCBI-ProteinID:
XP_039016944
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MASTATASSTGPRYAPPDPTLPKPWKGLVDGKTGYLYFWNPVTNVTQYERPTSGDSVPKP
TFTPLSSSVQVQQSSEGCHGYNPSKENDRDEKDSEAISSQNARSGPVHSHNKPNVTSSSV
IGGPSAKGQGTVAGGSNLSGDAYRRQHEITVTGDEVPLPFSSFESTGLPSEILREVHNAG
FSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLIPGFMHIKRCRKDPQMGPTVLVLS
PTRELATQIQDEAHKFGNSSRISCTCLYGGAPKGPQLREVEKGIDIVVATPGRLNDILEM
RKISLQQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKEVRKIAADLL
VNPIQVNIGNIDELVANKSITQHVEVLSPMAKHKRLEQILRSQEPGSKIIIFCSTKRMCD
QLARNLSRFGAAAIHGDKSQADRDYVLSQFRSGRTPVLVATDVAARGLDVKDIRVVINYD
FPTGIEDYVHRIGRTGRAGATGLAFTFFGDQDSKHASDLIKILEGANQKMPAELHELASR
GGGMGRPRGWAPSSGGHDGGCGGRTDSGYGGREGGRGGRGTSTFSSWHERGGGLGNGNES
GDRNDFGFHGSYDKGRNRSRSRSPDRFASASGREQSPVLSFHEMMMKRDRSSAGDH
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactgcgactgcctcttctactggtccccgttatgctccacctgatcccact
ctacccaaaccatggaaaggcctagttgatggtaaaactggttatctttacttttggaat
ccggtaacaaatgtcacacaatatgaaaggcctacaagtggtgattctgtcccaaaacct
acttttacacctttaagttcttcggttcaagttcaacagtcttctgaaggatgtcatggt
tataatcctagcaaggaaaatgaccgggatgaaaaggacagtgaagccatatcaagccag
aatgctagaagtggaccggttcattcccataataaacctaatgtgacttccagctctgta
atcggaggaccttcagctaaggggcaaggaacagtggctggtggaagtaatttgtctggt
gatgcttatcgccgtcagcatgagataacagtaactggagatgaagtgcccttgcctttt
tcatcatttgaatctaccggattaccttctgagatacttagagaggtacacaatgctgga
ttttctgcaccaactccaattcaggctcagtcatggccaattgcattgcaaggtagagac
atagtggccattgcaaaaactggttccgggaaaacattaggttaccttattcctggattt
atgcatatcaagcggtgccgtaaggatcctcaaatgggtccaactgtgttggtattatca
cctaccagggagctggctactcagatacaagatgaagctcacaagtttggcaattcatca
agaattagttgcacatgtttgtatggaggggcacccaaaggtcctcagttgagagaggtt
gagaaaggaattgatattgtggttgctactcctggccggttaaatgatattctagagatg
cggaaaatcagcctccaacaagtttcttaccttgtgttagatgaggctgatcgcatgtta
gacatgggctttgaacctcagatacggaagattgtgaaagaagtgccaacccgcaggcag
acgctcatgtacacagcaacatggccaaaggaagttcggaaaattgcagcagacctactg
gtaaatcctattcaggtcaacattggcaatattgacgagcttgtggcaaacaagtctatt
acgcagcatgttgaagtattatcaccaatggcaaaacacaaaagacttgagcagatactg
cgctcccaagaaccaggatccaagataattattttttgttcaaccaagaggatgtgtgat
caacttgctcgcaatctcagtcggtttggagctgctgctatccatggtgacaaatctcag
gctgacagggactatgtgcttagtcagttccgatctggtaggacaccagtgcttgttgca
actgatgtcgctgctcggggactggatgtcaaggacatcagggtggtaatcaactatgac
ttccctactggaattgaggattatgttcataggattgggaggactggaagggcaggtgca
acaggattggcatttacattctttggtgaccaggattcaaagcatgcttcagatttaatc
aaaattctagagggagctaaccagaagatgcctgcagaacttcatgaattggcttcacgt
ggtggtggcatgggaaggcctagaggttgggctcccagttctggtggccatgatggagga
tgtggtggacgcactgattcaggttatggtggtagggaaggtggaaggggtggtcgagga
acttctacattctctagctggcatgaaagaggtggagggcttgggaatggtaacgagtct
ggtgacaggaatgattttggtttccatggtagttatgataagggacgaaatcgcagccgg
agtcgtagccctgacaggtttgctagtgcttctggtcgtgaacaatccccagtgctcagt
tttcatgagatgatgatgaaacgtgatcggtcatccgcaggggatcactaa
DBGET
integrated database retrieval system
