Hibiscus syriacus (Rose-of-Sharon): 120147717
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Entry
120147717 CDS
T09559
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120147717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120147717
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120147717
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120147717
Atg1 complex
120147717
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120147717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
120147717
NCBI-ProteinID:
XP_039016958
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MASTHTSSHTEAAKMEQIITEFFYKSLFIILESRSPYVSSRNYSGEQTVSSPSSSSSSSS
SVRPRDKWFNLAIRECPSALQNLDLCRQSNFESVVVDVILEQKPLDWGPASFSPKRDLVV
NLSSKDKNSLCWNSDQEESGREMRSEKIIERWLVQHESRKGRDYNLGNRRSSCYNLSALY
KKLILLLRSLYVTVRLLPAYNIFRDLNSSGQICAFKIVPRVSSFVEPLAHKEEADMQRFW
FTPVDTSCGRLCLSVLYYSSISDTSSESSTPMSPQFIPNYVGSPLADPLRRFPSLPMSHG
SPTSLPFSRRHSWSYDHYKASPPLVSFSPSPTHSESHSLVSNQSSQRLPPMSLPSHPRET
SLAHKKVMNLDEYCPSPNFSASPSPSPSRPIHIPRSHLSEALLRSESAPVDIPGPKLVNS
PALSDKHNLPPSPPLKITRTDTSRTDNFRVPAETGATIEKLFSFGKEDCQKYSGMKVSSC
SSPRISSSSRSIQDDFDDSEFLCPFDVEDDEMTDPGSRAESYDKRMHPSDANEAGLFMNR
KSPDAAVGALVRMLKKAPPLRQDVSLNFSEASRPEMWSNSIQKQSQISEAVTVEPAAALS
TASSRLVASKTTADALEELRGYKVMKNLLLSEGGKAYTSASFASAAEHSRISKGT
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaactcatacgagttctcacactgaagcagccaaaatggaacaaattatcact
gaattcttctataagagtctttttataattcttgaatcgaggtctccttatgtgtcatca
cgtaattatagcggtgaacaaactgtgtcctctccatcttcatcctcatcctcttcatct
agtgtaagaccaagagataaatggttcaatttagctattagggagtgcccttcagcgcta
caaaatcttgacctttgtcggcagagtaattttgagtcggtagttgttgatgttatattg
gaacaaaaacctcttgattggggacctgcaagtttttcccccaaaagggatcttgttgtg
aatttgtcttctaaagataagaattcgctttgctggaattctgatcaagaagaatcaggc
agggagatgagaagtgaaaagattatagaaagatggttggtgcagcatgaaagtagaaag
ggtagggattataatttagggaatagaaggtctagctgttataatttgagtgcattatat
aagaaattgatattgttgttgaggtccttatacgtgactgtgaggcttttgcctgcttac
aacatttttcgcgatctcaattcatccggtcaaatctgtgcctttaagattgttcctagg
gtatcttcttttgttgagcccttggctcataaagaagaggctgatatgcagcgattttgg
tttacccctgtggacacttcttgcggaaggctttgcctttctgttttgtactattcatca
atctcagatacaagctcggagtcgtcaacccctatgtcccctcaatttataccaaattat
gttgggagcccattggcagacccattgaggagatttccttctcttcctatgtctcacggc
tctccaacatctttaccattctcaagaaggcatagttggagttatgaccattacaaggct
tcaccacctttggtttctttctcaccatcaccaacacattcggagtcgcactcattggtt
tctaaccagagctctcagcggttgccgcctatgagcttaccttctcatcctcgtgaaaca
tcactagctcataagaaggttatgaacttagatgagtattgtccttcccccaatttctct
gcttccccttccccatcaccatcacgccccatccacatacctaggtctcatttatcagaa
gctcttttacgctctgaaagtgctcctgttgacataccaggtcctaagcttgttaattcc
cctgcattgtctgacaagcacaatttgccaccatcacctccccttaaaattacaagaacc
gatacttctaggactgataattttagggtacctgctgaaactggtgcaacaattgagaag
ctgttctctttcgggaaagaagactgtcagaaatattctggaatgaaggtatcttcctgc
agttcaccacgaatttcaagttccagtaggtctatacaagatgattttgatgactctgag
tttctttgtccatttgatgtggaggatgatgaaatgacggaccctggtagcagagccgag
tcttacgataaaagaatgcatccatctgatgcaaatgaagcggggttgttcatgaataga
aaatccccagatgctgcagttggtgctcttgtccgtatgctgaaaaaagcccctcctctt
cgccaggacgtctcccttaatttttcagaagcctcaaggccagaaatgtggagcaacagc
atccaaaagcaaagtcagatctctgaggctgtgaccgttgaacctgctgctgctttgagt
actgcatcttcgaggcttgttgcatcaaagacaactgctgatgcattagaggaacttcgg
ggttacaaagtgatgaaaaatctgttgcttagtgaagggggtaaggcttacacatctgct
agttttgcttctgcggctgaacattccaggatcagcaaaggtacatga
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