Hibiscus syriacus (Rose-of-Sharon): 120147962
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Entry
120147962 CDS
T09559
Name
(RefSeq) nuclear pore complex protein NUP85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120147962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120147962
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120147962
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120147962
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120147962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
120147962
NCBI-ProteinID:
XP_039017113
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MPSASSDYGGGALVPISPESEVAAVYPLHHGLKYPISRLSISWSRGNSLLVSVFASPPSG
DSVEDDAGGKVVEVKLGGGDGEISDAHWRRIAYDSVSPFALLQSRKNAVSSLSKMSMNSP
YDADWWDYIMEYSKGINALLGSQRSASVPAIDDPKLVITKGEEPTSLKAAWELLEMFYAE
NPSHSWLPERLVDWLADYDSLFSGTHPTVHSKLVDFQKDLVNLQVVEENPKYWEVISSAL
AVGWLDIVVKMLRLHGSYRLDQLSNRETENGLVEAVAVLISKMPRMRLDQEAGKLGECFK
AKPDFVKAWEKWRGQIYKLDSSAFWFQCAHQQTREGLRSMLQIMLGNANSLSSATFHWIE
LYISHLLYIRPFTVGLESMYSLTQKSIQLKPMASAHRLMGLIIGILGENTEVVLAECLKG
FGPWMVAHAMELLAAGSDHAEMLLHEERQNLGGISIEELHQLIYAQVLSSHPLTWQIAPI
YLISCMKHGMVLLQILLSKQPVQDNQLLLKSIEICRLYELHSITSNIMKITGVHHWKHGR
KGCGVFWLQQARDEYRLNRIAQQLFDSVGKSISDESFKQWEGLIQLLGSDSKTAGGLEFL
HKYRDFKKSLQHVYDGKTTDAARKAVESLILLMKNPSTPQRFYLPLLYDSLKLLNWKDRP
LLNVSQTNLLLTKLQDLSMARLRPDFVESELPPQALNSVRLALATNLGRAILEE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgcctcgtcagattacggcggcggcgctctagttcctatttcaccggagtct
gaagttgcggcggtgtatcctctccatcatggcctcaagtatcctatctctagactctcc
atctcttggtctcgcggcaactccctcctcgtctcggtcttcgcttctcctccatccgga
gactccgtcgaagacgatgcaggaggaaaagtagtggaagtgaagctcggcggcggagac
ggcgagatcagcgacgctcattggcggaggatcgcctacgattcggtctctcctttcgca
ctactccaaagcaggaaaaatgcagtctctagcttgtcgaaaatgtccatgaattcacct
tacgatgctgactggtgggattacataatggagtacagcaaaggcataaatgcccttctt
ggtagtcagagatctgcttcagttccggctatcgacgacccaaagttagtcataacgaaa
ggagaggaaccgactagtttaaaggctgcgtgggagctattggaaatgttttatgcagaa
aatccatctcattcatggttacctgaacgacttgttgattggttagctgattatgatagc
cttttctcgggaacacacccaacagtgcactcaaagcttgttgattttcaaaaagacctt
gtaaacttgcaggttgtggaggaaaatcccaaatactgggaagttatatcatcagcacta
gctgttggttggctggatattgtggttaagatgctgcgcttgcatggatcttatcgatta
gatcaactcagcaatcgtgagacagagaatggactagtcgaggcagttgctgttctcatt
tcaaaaatgccacgaatgcgattggatcaagaagctgggaaattgggtgaatgctttaag
gccaagcctgattttgtgaaggcatgggagaaatggcgtggacagatatataaactggat
tcaagtgcattctggtttcagtgtgctcatcagcagactcgggagggcttgagaagtatg
ttacaaataatgctgggtaatgcgaatagtctcagctctgcaacattccattggatagag
ctgtatatttctcacttgctatacatccggccattcacagtggggttagaaagcatgtac
agcttgacacagaaaagcattcaattgaaaccaatggcctctgcacataggttgatgggg
cttataataggaattcttggggaaaatactgaggttgttttagcagaatgcttgaaagga
tttggtccttggatggttgcgcatgccatggagttattagctgctgggagtgaccatgca
gaaatgcttttacatgaagagcgtcagaacttggggggaataagcatagaggagcttcat
caacttatttatgctcaagtcctatcctcacatccactaacttggcaaattgctccaatt
tatcttatatcatgcatgaagcatgggatggttctgttacagatattattgtccaagcag
cctgttcaagataatcagttattgctgaagagcatagagatttgccgcctttacgaactc
cacagcataacttcaaatattatgaagattactggagtacaccactggaagcatggtcgg
aaaggttgtggagtgttttggcttcaacaagctcgggatgaatatcgtcttaataggata
gctcagcaattgtttgattcagttggaaaatcaatatccgatgagagtttcaagcaatgg
gaagggttaattcagttattgggttcggattctaagactgctggtggactagagttcctg
cacaaatatcgagacttcaagaaatcacttcagcatgtttatgatggaaaaactacagat
gctgctcggaaggctgtggaatctcttatattgcttatgaaaaacccttctacacctcaa
cgcttttatctgcctcttctttatgattcgttgaagttgcttaattggaaggatcgtcct
ttgttgaacgtgtctcagacaaatcttctattaactaaactacaagatttgtctatggca
aggcttcggccagatttcgtagaatccgagttaccaccccaggccttgaactctgttaga
cttgcacttgccacgaatctgggacgtgcaatccttgaggaatga
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