KEGG   Hibiscus syriacus (Rose-of-Sharon): 120148243
Entry
120148243         CDS       T09559                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120148243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120148243
   03041 Spliceosome [BR:hsyr03041]
    120148243
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120148243
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120148243
Spliceosome [BR:hsyr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    120148243
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 120148243
NCBI-ProteinID: XP_039017340
LinkDB
Position
Unknown
AA seq 499 aa
MAKKRKQRSSAVEPTKTTADPQPIEEEEEKQQHQEYIPEDPKPKVEEEQPQEVEEEVEEE
VEEEVEEEEEVELDEDEEEDENEEDDEEEEEENQTLDGNGVSKGTSQEEELDDEPFETLL
QPFGKDQLITLIRKAVEKHPEFISSVRELADVDPSQRKIFVHGLSWDTTAETLTAEFSRY
GEIEECKAVTDRVSGKSKGYAFILFKNRSGARRALKQPQKKIGNRTTSCQLASQGPVPAP
PPTAPPVSEYTQRKIFVSNVSTEMDPEKLLEFFKQFGEIEEGPLGLDKHTGKPKGFALFV
YRSVESARKALEEPHKNFEGHVLHCQKAIDGPKPTKGGYAGGASSGHHQPYQQHQQGQHQ
NQSRYHHAKKGKYSSSGSETGHLMAPSGPAAVGVGFNPGVAAAGLNPGVALTAPALNPVL
GQALTALLASQSSGFGLGNLLGGLGGAPVNQGAPAAGYGGQVTGGYGNQMGVQGGYQNPP
TGQGGAGRNQPGGGAPYMG
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggctaagaagagaaagcaacgatcttctgcggtcgaacccactaaaacaacagcagat
cctcaaccaatcgaagaagaagaagagaaacagcaacatcaagaatacatacccgaagat
ccgaaacctaaagtagaagaggaacaaccccaggaagttgaggaggaagttgaagaagaa
gtagaagaggaggttgaagaagaagaggaagtggagctggatgaggacgaggaggaagac
gagaacgaggaggacgacgaagaagaagaagaggaaaaccaaaccctagatggaaacgga
gtatcgaaaggaacgagtcaagaagaggaattggacgacgagccgttcgagacacttcta
caaccgtttgggaaagatcaattgattacgcttattaggaaagctgtcgaaaagcaccca
gagttcatatcttcggttcgtgagcttgccgatgtggacccgtctcaacggaagatcttc
gttcacggtctcagttgggataccactgctgaaaccctcaccgccgagttttctaggtat
ggggaaatcgaagaatgcaaagcggttaccgatagggtttctgggaaatccaagggttat
gcttttattctctttaaaaatcggagtggagctcgtcgggctttgaaacagcctcagaag
aagattgggaatagaactacttcttgtcagttggcttcgcaagggccggttccagcacct
cccccaactgcgccgcctgtgtctgagtatactcagagaaagatttttgttagtaacgtt
tctactgaaatggaccccgagaagttgcttgagttttttaaacagtttggggaaattgag
gaaggtccgttggggcttgataagcatacagggaaaccgaaagggtttgctctttttgta
tacaggtcggttgagagtgcaaggaaggccttagaagagccacacaagaattttgaaggc
catgttttgcattgccagaaggccattgatgggccaaaaccgactaaaggtggttatgca
ggaggtgcttcttctgggcatcatcagccgtaccagcagcaccagcaagggcaacatcag
aatcagtctcgttaccatcatgctaagaaggggaagtactcttctagtggatcagagacc
ggtcatttgatggctccgtctgggcctgctgcagtgggagtggggttcaaccctggagtt
gctgctgctgggttgaaccctggggtggctcttactgctccagctttaaacccagtgctt
ggacaggctttgactgcgttgcttgcttctcaaagttctggttttgggctcggtaatctg
ctaggagggcttggtggtgcccctgtgaaccagggagcacctgctgcaggttatgggggt
caggttacaggaggctacgggaaccagatgggagtacagggtgggtatcagaacccaccg
acggggcagggcggtgctggtaggaaccagcccggtggtggtgctccttacatgggatag

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