Hibiscus syriacus (Rose-of-Sharon): 120148322
Help
Entry
120148322 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin-like
KO
K23288
syndetin
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120148322
Membrane trafficking [BR:
hsyr04131
]
Protein recycling
Others
EARP complex
120148322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
120148322
NCBI-ProteinID:
XP_039017406
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MQQPNLFPFGSLLGNPFLLNGGVGDLSDGGFESSRVFFLVPFLLSQGGGMDLSKVGEKLL
SSVRSARSLGLLPSAPSSDRPDVPARAAAAAAVARALSGLPADQRYNLPSSSEELMSIYG
SKPQSQIVEEVEEEFYEEMFDPIKHVLEHIPSEENELEYFERQATLRLAQLDRVAEHLSR
NVMEHHEVMVKGMHLVSELEKDLKIANVICRNGRRHLNSSMNEVSRDLVVNTDSKKKQAL
MHLLPVLAELLHARDMQVALESLVEEGNFCKAFQVLSEYLQLLDSLSELSAIQEMSHGVE
VWLGRTLQKLDSLLLGVCQEFKEEGYLTVVDAYSLIGDVSGLSEKIQSFFMQEVISETHA
VLKSIVLHEDQDVHMQNSRLTYSDLCLQIPESKFRQCFLRTLAVLFKLMCSYHEIMAFQP
ENKVLECPITNANLMEESVDQRPGSSSMKESTTATSMSDTSERKDSGAGGLVSEGRNEDG
ATSSSVSPWYQLRKEAITFVSQNLQRGRKNLWQLMTSRVSVLLSASAAASTSIHQLLKNY
EDLNTFILAGEAFCGAEAFEFRQKLKGVCGNYFDAFHRQNVSALKMVLERETWLSLPPET
AEIISFAGLVGDGAPLMAASGGRSSNSRVLHIDKSANKVDTDVKKSVFSPWLRNGNPFLL
KVSCSYKETHNSSPLNGATSVVFDGNADNIHGDVSPHNDDENNINGSNSISEEENEDLLA
DFIDEDSQLPSRISKPILSRGYSFHGIDDFTAQTGLSLCVLRSMDKYARLMQKLEIINIE
FFKGICQLFELFFHYIFETFGLQNMNSSAKTSTDSLNYRLKEALSRITQDCEEWIKTSSG
SFSSTTGHADLTPTAPQNTNFGSPASTSVGLKERCAGADTIALVARILHRSRTNLQSLLL
KSNTTVVEDFFVHLVDAVPDLIEHIHRTTARILLHINGYVDRIANAKWELKELGMEHNGY
VDLLLGEFKHYKTRLAHGGIQKDVQDLLLDYGLEIVAETLIEGLSRVKRCTDEGRALMSL
DLQVLINGLQHFVPLNVKPKLQIVETFIKAYYLPETEYVXWARAHPEYSKSQIVGLINLV
ATMKGWKRKTRLEVLEKIE
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgaatctgttcccgttcggaagccttttggggaatccgtttttattgaat
ggcggcgttggcgatttaagcgacggtggatttgagagctctagggttttcttcttggtt
ccttttttgctatcccaaggaggtggaatggatttgtccaaggttggggaaaaactcctc
agctccgtgcgttccgcgcgatcacttggtctcttgccttctgctccttcttctgatcgg
cctgatgttccagctcgagctgcagcagctgctgctgttgctcgtgctctttcaggattg
ccagctgatcagagatataatcttccatcgagttctgaagaattgatgtcaatatatgga
agcaaacctcagagtcaaatagtagaagaagtagaggaagaattctacgaggagatgttt
gatccaataaaacacgtcctggagcatatcccttctgaagaaaatgaactagaatatttt
gagagacaggccacacttagattagctcaactggatagagtagcagaacatttatcccgc
aatgtcatggagcatcatgaagtaatggtgaagggtatgcatttggtcagtgaattggag
aaagacttaaagattgcaaatgtcatctgtaggaatggcagaaggcatctaaactcatca
atgaacgaggtttcaagggaccttgttgtaaatactgattccaagaaaaaacaggctctt
atgcacttgcttccagtacttgctgagcttcttcatgcacgggatatgcaagtagctctt
gagtctcttgttgaggaaggtaatttctgcaaggcatttcaagtactatctgagtattta
caactactagacagtttatcggagctctcagcaatacaagagatgagccatggggttgag
gtttggctcggaaggactcttcaaaagctggattctctcttgttaggagtttgtcaggag
tttaaagaagaaggctatttaaccgtggttgacgcttattctttaataggagatgtctct
ggcctttctgaaaagatacaaagttttttcatgcaagaagttatctcagaaactcatgct
gtgttgaagagtattgttctgcatgaggaccaagatgtacatatgcaaaatagcagactt
acctacagtgatctatgccttcagatacctgaatctaagtttagacagtgtttcttaaga
acactggctgtcctgttcaaactaatgtgctcttatcatgaaatcatggcctttcagccg
gagaataaggttttagagtgcccaataacaaatgccaatttgatggaagagtctgtagac
cagagaccaggttcatcttccatgaaggagtctacaacagccacgtccatgtctgataca
tctgaaaggaaagattctggggctggtggactggtttctgagggtagaaatgaagatggt
gctacgtcaagcagtgtatctccgtggtatcaattaaggaaagaagccataacttttgtg
tcacaaaacctgcagaggggacgtaagaatctttggcaacttatgactagccgagtatca
gtattgctgtctgcttcagctgctgcttctacaagcattcatcaacttttaaaaaattat
gaagatcttaacactttcatcttggctggggaagccttctgtggagcagaggcttttgaa
ttcaggcagaaactgaagggtgtttgcggaaattattttgatgcatttcataggcaaaat
gtatctgcgcttaaaatggttttggagagggaaacctggcttagtttgccaccagagact
gccgaaataattagctttgctgggctggtcggtgacggagcacccttaatggctgcatct
ggtggaaggtcttctaattctagggtccttcacattgacaaatcagccaacaaagttgac
acagatgttaagaagagtgtgttttctccttggcttagaaatggcaacccatttttgcta
aaagtaagctgcagttacaaagagactcacaattcctccccacttaatggagcaacctct
gtggtatttgatggaaatgctgataatattcatggtgatgtctctccacacaatgacgat
gagaataatatcaatggctccaattccatctctgaagaggaaaatgaggatttacttgct
gactttattgatgaggatagtcagctccctagtcgaatttcaaaacccatcctttcaaga
ggttactcttttcatggcattgatgattttacagcacaaaccggattatctctttgtgtt
ctaaggtcgatggataagtatgcaagattgatgcagaaacttgaaataataaatatcgag
ttttttaagggcatatgccaattatttgagttgtttttccattatatatttgaaacattt
ggtctgcaaaacatgaattcaagtgcaaagacttcaactgattctcttaattatcggtta
aaggaggccttatcgagaataacacaagattgtgaagagtggataaaaacttcatcagga
tccttctcatctacaactggacatgcagatttgacacccactgctcctcaaaatacaaat
tttggttctccggcaagcacctccgttggtctaaaggaaaggtgtgcaggtgctgatact
atagcccttgtagcccggatattgcatagatcaagaactaatctccaatcattgcttctg
aagagtaatacaactgtagttgaagatttctttgtgcacctggtggatgctgtgccagat
cttatagagcacatacacaggacaaccgcaagaatactgctccacattaacgggtacgtt
gatcgaattgctaatgcgaaatgggaattgaaagagcttggaatggagcacaatgggtat
gtggatctgttgttgggagaatttaagcactacaaaacaaggcttgctcatgggggaatt
cagaaagacgttcaagacctcctcttggactatggacttgaaattgttgcggaaactctt
attgaaggtctatcccgagtgaagcgatgcaccgatgaaggacgagctctcatgtcttta
gaccttcaggttctaatcaatggcctacaacactttgtccccttgaacgtgaagccaaag
ttacagattgtcgaaactttcatcaaggcttattatcttcccgaaaccgaatacgtannc
tgggcacgagctcatcctgaatacagcaagagtcagatagtggggttgataaaccttgtt
gctacaatgaaaggttggaaaagaaaaaccaggttggaagttctggaaaagatcgagtga
DBGET
integrated database retrieval system
