Hibiscus syriacus (Rose-of-Sharon): 120148474
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Entry
120148474 CDS
T09559
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120148474
03041 Spliceosome [BR:
hsyr03041
]
120148474
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120148474
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120148474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_PARP14_3
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
120148474
NCBI-ProteinID:
XP_039017515
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MDPLRLKQQQQALMQQALLQQQSLYHPGILAPPQIEPIPSGNLPPGFDPSTCRSVFVGNI
HSQVTEPLLQEVFASTGPVEACKLIRKEKSSYGFIHYFDHRSAALAIFSLNGRHLFGQPI
KVNWAYASGQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYQSCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQSAINDLNGKWLGSRQIRCNWATKGASSNDDKQSSDAKSVVELTNGSS
EDGKETTTNNEAPENTPQYTTVYVGNLAPEVTQLELHRHFHALGAGVIEEVRVQRDKGFG
FVRYNTHAGAALAIQMGGTQSFLCGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGFSAI
DLLAYERQLAMSKMGGVHALMHQQGQHPLKQAAMGVSAAGGSQAIYDGGFQNVAAAQQLL
YYQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatcccctgaggctgaagcaacagcaacaggccctgatgcaacaagctctcctccaa
caacagtctctctatcaccctggcatcttggcacctcctcagatagagccaatcccaagt
ggaaatctgcctcctggttttgatccaagtacttgccgcagcgtgtttgtgggaaacatc
cattctcaagtgactgaaccactactacaagaggtttttgcaagtactggtcctgtggaa
gcttgcaagcttattagaaaggaaaagtcatcatatgggttcattcactacttcgatcat
cgatcagctgctcttgctatattttctctaaatggaaggcatttatttggacagcctatc
aaggtcaattgggcatatgctagtggtcagagagaggatacatcaggtcactttaatatt
tttgttggggatctcagtcctgaggttactgatgcaatgctgtttgcatgcttctctgtc
tatcagagttgttcggatgcgagggttatgtgggatcaaaaaacaggtcgttcaagagga
tttgggtttgtttcattccgaaaccagcaggatgcacaaagtgcaattaatgacttaaat
ggaaagtggcttggcagtcggcagatccgttgtaactgggcaacgaagggtgctagtagc
aacgatgacaagcaaagctcagatgctaaaagtgtggttgaactaaccaatggttcatca
gaggatggtaaagagaccaccaccaataatgaggctccagagaatactcctcaatatact
actgtttatgtgggcaatcttgctccagaggtcactcaacttgaactccatcgtcacttc
catgctcttggtgctggggtgattgaggaggttcgggttcagcgtgacaaaggctttggc
tttgttagatacaatacacatgctggggctgctttggctattcagatggggggcactcaa
tcatttctatgtggaaagcaaattaagtgctcttggggcagcaaacctacaccacctggg
acaagttcaaatccacttcccccacctgcagctgcacctttacctggtttttcagcaatt
gaccttttagcttatgagaggcagttggctatgagcaaaatgggtggcgttcatgcccta
atgcaccagcagggacagcaccctctcaagcaggcagcaatgggagtgagtgctgctgga
ggcagccaggctatatatgatggtggcttccagaatgttgctgctgcccagcagctattg
tactatcagtaa
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