Hibiscus syriacus (Rose-of-Sharon): 120148640
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Entry
120148640 CDS
T09559
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04142
Lysosome biogenesis
hsyr04144
Endocytosis
hsyr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120148640
04142 Lysosome biogenesis
120148640
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120148640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120148640
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120148640
Membrane trafficking [BR:
hsyr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120148640
Exosome [BR:
hsyr04147
]
Exosomal proteins
Proteins found in most exosomes
120148640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
120148640
NCBI-ProteinID:
XP_039017639
LinkDB
All DBs
Position
Unknown
AA seq
1703 aa
AA seq
DB search
MAAANAPISMKEVLTFPSIGISPQFITFTNVTMESEKYICVRETAPQNSVVIIDMSMPMQ
PLRRPISADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI
SPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLVNNQIINYKCDPSDKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQVLEAHAASFAQFNVPGNENPSILISFSTKSFNAGQVTS
KLHVIELGAQPGKPSFSKKQADLFFPPDFQDDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNKISPDPIFLTSEASAVGGFYAINRRGQVLLATVNEATIIPFVSGQLNNLEL
AVNLARRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNEFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EQQTLVEFFGTLSREWALECMKDLLMVNLRGNLQIIVQVAKEYCEQLGVDACIKIFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERMTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRASEDADIYTDLVRYLLMVRQKVKEPKVDSELIYAYAKIDRLGEI
EEFILMPNVANLQNVGDRLFDEALYEAAKIIFTFISNWAKLAVTLVRLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPEAWDHMQFKDIIIKVASVELYYKAVHFYLQEHPDLINDMLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNHYRDAIETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRADVVLELAWIHNMIDFAFPYMLQFIREY
TSKVDELIKDKIEAQKEVKAKEQEEKEVNAQQNMYAQLLPLALPAPPMPGMGGGFTPPPP
QSYMGGMGMPPMPPYGMPPMGSY
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccaatgctcccatctccatgaaggaggtcttgacttttccgagcattggt
attagtcctcaatttatcacattcacgaatgttactatggaatctgagaagtatatttgt
gtgagagaaacggcgccacaaaatagtgttgtgatcattgacatgagcatgccaatgcaa
ccgctgagacgacctatttcggcagactctgctcttatgaatccgaattctagaatcctc
gctttgaaagctcaacttccaggaacaactcaagatcacttgcaaatatttaacatagag
atgaaagcaaaaatgaaatcacatcagatgcctgaacaggttgtattttggaaatggatt
agccccaaaatgcttggcctggtcacacagacctctgtgtatcattggtcaattgaaggt
gattctgagccagttaagatgtttgagaggacagctaatttggtgaacaatcagataata
aactataaatgtgatccttcggataagtggttggttttgattggaattgcccctggagca
cctgagaggccacaattggttaaggggaacatgcaacttttctctgttgatcagcagcgt
agccaagttcttgaagcacatgctgcctcatttgctcaatttaatgtcccaggaaatgag
aatccttctattcttatttcgttttccaccaagagttttaatgctgggcaggttacatct
aagttacatgtaatcgagctgggtgcccagccaggtaagccatcgttttcaaagaaacag
gcagatctattctttccaccagattttcaagatgattttccagttgcaatgcagatatcc
cacaaatacagtttgatttacgtgatcaccaaacttgggctgctgtttgtttatgatcta
gagacagcgactgctgtatacagaaataaaatcagcccagacccaatatttttaacctcg
gaagcttcagcggtcggagggttttatgccatcaacaggcgaggtcaggtgttgctggct
actgtaaatgaagctacaataataccatttgtcagcggtcaattaaacaatttggagctt
gctgtcaatctggctagaaggggaaaccttcctggtgcagagaacctggttgtccaacgt
tttcaagaactttttgctcagaccaagtataaagaagctgctgagcttgctgccgagtct
ccacaagggatccttcgcactccagatacagttgcgaagtttcagagtgttccagtgcaa
gctgggcagactccaccactgttgcaatactttggtacacttctaactaaagggaagctc
aatgaatttgaatcattagagttatcccggcttgtggtaaaccaaaacaagaagaatctt
ctggaaaattggttggctgaggataaattggaatgcagtgaagaactgggagaccttgtg
aagactgtggacaatgatcttgccctgaaaatatatattaaagctagggcaacgccaaaa
gttgttgcagctttcgctgaacgtcgggagtttgacaagatcttgatttactcaaaacag
gttgggtacactcctgactacttgttccttctgcaaacaattcttcggacagatccacag
ggagctgttaattttgcattgatgatgtctcaaatggagggtggttgtccagttgattac
aacacaatcactgatctttttcttcagaggaacttgatacgggaagctactgcatttcta
ttagatgttttgaaaccaaatttgccagagcatgcctttcttcaaacaaaggtcttggaa
atcaatctagtaacatttccaaatgttgctgatgccattttagcaaatggaatgttcagc
cactatgaccgtccccgaattgcacaactttgtgagaaagctggtctgtatgtacgagct
ctacagcattacactgagttaccagatattaaacgtgtcatcgtgaatacacatgctatt
gagcaacagacgcttgttgaattttttggtactctttcacgtgaatgggctttggagtgc
atgaaggaccttctgatggttaatcttagaggcaaccttcaaataattgtgcaggttgct
aaggagtattgtgagcaattgggtgttgatgcttgcataaaaatttttgagcaattcaag
tcttatgaaggattgtactttttcctgggctcttatttgagctcaagcgaggaccctgat
atacactttaagtacattgaggcagccgccaaaactggacaaataaaggaggttgagcgc
atgaccagggagtcaaacttttatgatgctgaaaagacgaagaacttcttgatggaggcc
aagcttccggatgctaggccactgattaatgtttgtgatcgatttggttttgttccagat
ctcactcactacctctatacaaataatatgctacgttacattgaaggttatgtgcagaag
gttaacccagggaatgctccgttggtagtggggcagttgctagacgatgaatgtcctgaa
gactttataaagggtctcatcctttcagtccgttctttgcttccagttgagccccttgtg
gaggaatgtgagaagagaaatcgacttcgtctattgacacagttcttggagcaccttgtg
agtgagggaagccaagatgtgcatgttcacaatgctctgggtaaaattatcattgatagc
aataacaatccggagcacttcctcacaaccaacccttactacgattctcgggttgttggt
aagtactgtgagaagcgtgatcccaccctggcagttgtggcttaccgaagaggccaatgt
gatgatgagcttataaatgtcacaaataagaactccttgtttaaattgcaggctaggtat
gttgttgaaaggatggatggtgatctttgggagaaggttctaaatcctgagaatgaatat
aggaggcagctaattgatcaggttgtatcgactgctttgccagaaagcaagagtcccgaa
caagtatccgcagctgttaaagctttcatgacagctgacctgccgcatgaactgattgag
cttcttgagaagattgtactccagaactctgcattcagtgggaacttcaatttgcagaat
ctacttattttgacagctataaaggcagatccatctagagttatggattatatcaatagg
ttagataattttgatggacctgcagtcggagaagtggccgttgaagctcaactgtatgaa
gaagcttttgctatcttcaaaaagttcaacttaaatgtgcaggctgtcaatgtattattg
gataatattagaagcattgatcgggctgtggaatttgcattcagagtcgaagaagatgct
gtttggagtcaggttgcaaaggctcaactgcgggaggggctggtgagcgatgcaattgaa
tcatttattcgtgctgatgatgctacccagttcctcgatgttatccgagcttctgaggat
gctgatatctacactgatttggtgaggtatcttctgatggttcggcagaaagtcaaggag
cccaaggtggacagtgaacttatttatgcctatgcaaagattgatagacttggtgaaatt
gaagaatttattctcatgccaaatgttgctaatcttcaaaatgttggtgaccggttgttt
gacgaagccctatatgaagctgcaaaaataatatttacatttatatcgaactgggccaaa
ttggctgttacattggtgaggcttaaacaattccaaggtgctgttgatgcagcgcgcaaa
gcaaacagcgcaaagacatggaaagaggtttgctttgcttgtgttgatgcggaggaattc
cgattggcacagatatgtggtcttaacatcattgtacaggtggatgacttagaagaagtc
agtgagtactatcagaacagaggatgcttcaatgagttaatctcgctcatggagagtggt
ttaggactcgaacgtgcacatatggggatcttcactgagttgggagttctgtatgccaga
tatcgtccagagaagcttatggagcacattaaattgttctctactcgtctgaatattccc
aagctgataagagcttgtgatgaacagcagcactggaaggaacttacctacttatacatc
caatatgatgagttcgataacgctgcaactactgttatgaaccactctcctgaagcatgg
gatcatatgcagttcaaagatatcattatcaaagttgctagtgttgaactttattacaag
gctgtccacttctacctgcaagaacaccctgatcttataaatgacatgttgaacgtgctt
gcacttcgcgtggaccacactcgtgtagtcgatattatgcgaaaggctggtcatctacga
cttgtgaagccatacatgattgctgttcaaagcaacaatgtgtcagctgtaaacgaggct
ttgaatgagatttatgtagaggaagaagattatgatagattgagagaatctattgacttg
catgataactttgatcagattggccttgcacaaaagattgagaaacatgaactgcttgag
atgaggcgtgttgccgcatacatttacaagaaggcgggcagatggaagcaatccattgcc
ttgtcaaagaaagacaaccattacagagatgcaattgaaacagcttcacagtctggtgat
cgtgaacttgccgaggagttacttgtttacttcattgaacagggaaagaaggaatgcttt
gcatcatgcctctttgtttgttacgacttgattcgagcagatgttgttcttgagctagcc
tggattcacaatatgatcgacttcgcattcccatatatgttgcagtttattcgtgaatat
accagcaaagttgatgaacttatcaaggataagatcgaggctcaaaaggaagtaaaggct
aaagaacaagaagaaaaggaagtgaacgcgcagcagaatatgtatgctcagttgctacct
ctagccttacctgcaccaccaatgccgggtatgggaggaggttttacaccaccgccacct
cagtcctacatgggaggaatgggaatgcctccaatgccaccttatggcatgccaccaatg
ggcagctattaa
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integrated database retrieval system