KEGG   Hibiscus syriacus (Rose-of-Sharon): 120148948
Entry
120148948         CDS       T09559                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120148948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120148948
   03036 Chromosome and associated proteins [BR:hsyr03036]
    120148948
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120148948
Chromosome and associated proteins [BR:hsyr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120148948
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 EIF3I Beta-prop_TEP1_C Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st WD40_RFWD3 Vitelline_membr
Other DBs
NCBI-GeneID: 120148948
NCBI-ProteinID: XP_039017839
LinkDB
Position
Unknown
AA seq 348 aa
MSTFGAVSANHNPNKSLEVAQPPSDSVSSLSFSPKANFLIATSWDNQVRCWEISRSGTAV
ASTPKASITHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVA
WIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVKYPLMVVGTADRNLIVFN
LQNPQNEYKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDGQQSKNFTFKCHR
DGSEIYSVNSLSFHPAHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSTFNNDGS
IFAYSVCYDWSKGAENHNPSTAKTYIFLHLPQESEVKGKPRVGTSSRK
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtctacatttggcgccgtttccgccaatcataaccctaacaaatcattagaggttgcg
caaccgcccagtgattctgtttcaagccttagtttcagtcccaaggccaatttcttgatt
gctacttcatgggataatcaggtgagatgttgggaaatatcccggagtggtacagctgtt
gctagtacaccgaaggcatcaattactcatgatcaaccggtgttgtgctcagcttggaag
gatgatgggacgacagtcttttctggaggctgtgacaagcaggtcaagatgtggccttta
ttatctggtggtcaaccaatgacagttgccatgcatgatgcccctattaaagaggttgct
tggattccagaaatgaacctcttggccaccggaagctgggacaagacattaaaatattgg
gatacaaggcagcctaacccagtacatactcaacaacttcctgatcgatgctatgcactc
acagtgaaatatccattgatggttgttggcactgcagatagaaatctaattgtctttaac
ttgcagaatcctcagaatgaatacaagagaatcacatcaccccttaagtatcagacaaga
tgtgttgctgccttccctgaccagcaaggttttttggttggttcaattgagggaagggtt
ggagtacaccaccttgatgatggacaacagagtaagaactttacattcaaatgccacagg
gatggcagtgagatatattctgttaactcgttaagcttccatcctgcacatcacactttt
gccactgcaggttcggatggtgctttcaatttctgggacaaggatagtaaacagagacta
aaggcaatgtcaagatgcagccaacctataccatgcagtactttcaacaatgatggatca
atattcgcgtattcggtttgttatgactggagtaagggtgctgaaaatcacaacccgtca
acagcaaaaacctacattttcctgcacttgccacaggaatctgaagttaaaggcaagcca
agagttggaacaagtagtagaaagtga

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